RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 ZFAND5O76080 213 aa18.2■□□□□ 0.5
SEC22A-208ENST00000487572 ATP1B1P05026 303 aa18.2■□□□□ 0.5
SEC22A-208ENST00000487572 G6PDP11413 515 aa18.2■□□□□ 0.5
SEC22A-208ENST00000487572 NTSP30990 170 aa18.2■□□□□ 0.5
SEC22A-208ENST00000487572 SSTR4P31391 388 aa18.2■□□□□ 0.5
SEC22A-208ENST00000487572 DIO3P55073 304 aa18.2■□□□□ 0.5
SEC22A-208ENST00000487572 ARG2P78540 354 aa18.2■□□□□ 0.5
SEC22A-208ENST00000487572 MEP1AQ16819 746 aa18.2■□□□□ 0.5
SEC22A-208ENST00000487572 SMU1Q2TAY7 513 aa18.2■□□□□ 0.5
SEC22A-208ENST00000487572 SLC9B1Q4ZJI4 515 aa18.2■□□□□ 0.5
SEC22A-208ENST00000487572 FAM111BQ6SJ93 734 aa18.2■□□□□ 0.5
SEC22A-208ENST00000487572 LARP4Q71RC2 724 aaKnown RBP eCLIP18.2■□□□□ 0.58e-7■■■□□ 16.6
SEC22A-208ENST00000487572 SAMD14Q8IZD0 417 aaPredicted RBP18.2■□□□□ 0.5
SEC22A-208ENST00000487572 ZADH2Q8N4Q0 377 aa18.2■□□□□ 0.5
SEC22A-208ENST00000487572 OR9A2Q8NGT5 310 aa18.2■□□□□ 0.5
SEC22A-208ENST00000487572 LMF1Q96S06 567 aa18.2■□□□□ 0.5
SEC22A-208ENST00000487572 LIN28AQ9H9Z2 209 aaKnown RBP18.2■□□□□ 0.5
SEC22A-208ENST00000487572 SH3BP4Q9P0V3 963 aa18.2■□□□□ 0.5
SEC22A-208ENST00000487572 TCP11X1B4DZS4 312 aa18.19■□□□□ 0.5
SEC22A-208ENST00000487572 WDPCPO95876 746 aa18.19■□□□□ 0.5
SEC22A-208ENST00000487572 IGKV3-11P04433 115 aa18.19■□□□□ 0.5
SEC22A-208ENST00000487572 NCBP2P52298 156 aaKnown RBP eCLIP18.19■□□□□ 0.5
SEC22A-208ENST00000487572 RNF4P78317 190 aa18.19■□□□□ 0.5
SEC22A-208ENST00000487572 NADK2Q4G0N4 442 aa18.19■□□□□ 0.5
SEC22A-208ENST00000487572 ZNF385BQ569K4 471 aa18.19■□□□□ 0.5
SEC22A-208ENST00000487572 IGFL3Q6UXB1 125 aa18.19■□□□□ 0.5
SEC22A-208ENST00000487572 RNF111Q6ZNA4 994 aa18.19■□□□□ 0.5
SEC22A-208ENST00000487572 C16orf47Q6ZP98 133 aaPredicted RBP18.19■□□□□ 0.5
SEC22A-208ENST00000487572 VWA5B2Q8N398 1253 aa18.19■□□□□ 0.5
SEC22A-208ENST00000487572 KRTCAP2Q8N6L1 136 aa18.19■□□□□ 0.5
SEC22A-208ENST00000487572 RBMXL3Q8N7X1 1067 aaKnown RBP18.19■□□□□ 0.5
SEC22A-208ENST00000487572 TEX19Q8NA77 164 aa18.19■□□□□ 0.5
SEC22A-208ENST00000487572 CIDECQ96AQ7 238 aaPredicted RBP18.19■□□□□ 0.5
SEC22A-208ENST00000487572 DOCK10Q96BY6 2186 aa18.19■□□□□ 0.5
SEC22A-208ENST00000487572 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.19■□□□□ 0.5
SEC22A-208ENST00000487572 ASIC5Q9NY37 505 aa18.19■□□□□ 0.5
SEC22A-208ENST00000487572 MAT2BQ9NZL9 334 aa18.19■□□□□ 0.5
SEC22A-208ENST00000487572 ABI3Q9P2A4 366 aa18.19■□□□□ 0.5
SEC22A-208ENST00000487572 CSAG2Q9Y5P2 127 aa18.19■□□□□ 0.5
SEC22A-208ENST00000487572 CHD6Q8TD26 2715 aa18.19■□□□□ 0.5
SEC22A-208ENST00000487572 ATRXP46100 2492 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 DYTNA2CJ06 578 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 GABRR3A8MPY1 467 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 MYO1GB0I1T2 1018 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 ZNF195O14628 629 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 SCAMP2O15127 329 aaKnown RBP18.18■□□□□ 0.5
SEC22A-208ENST00000487572 PDPK1O15530 556 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 PCSK2P16519 638 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 MPIP34949 423 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 MLF1P58340 268 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 MRPS35P82673 323 aaKnown RBP18.18■□□□□ 0.5
SEC22A-208ENST00000487572 GUCY1A3Q02108 690 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 MGAT2Q10469 447 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 KLRB1Q12918 225 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 PDE7AQ13946 482 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 EXOSC7Q15024 291 aaKnown RBP18.18■□□□□ 0.5
SEC22A-208ENST00000487572 PRICKLE4Q2TBC4 344 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 IGFL2Q6UWQ7 119 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 RGS9BPQ6ZS82 235 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 R3HCC1LQ7Z5L2 792 aaKnown RBP18.18■□□□□ 0.5
SEC22A-208ENST00000487572 HPS6Q86YV9 775 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 C9orf40Q8IXQ3 194 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 FAM9CQ8IZT9 166 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 OR7A2PQ8NGA2 310 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 SUN3Q8TAQ9 357 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 NUDT8Q8WV74 236 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 KAT2AQ92830 837 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 GAL3ST4Q96RP7 486 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 ANKRD10Q9NXR5 420 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 TAS2R7Q9NYW3 318 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 LUZP4Q9P127 313 aa18.18■□□□□ 0.5
SEC22A-208ENST00000487572 WWP2O00308 870 aa18.17■□□□□ 0.5
SEC22A-208ENST00000487572 CLPSP04118 112 aa18.17■□□□□ 0.5
SEC22A-208ENST00000487572 SLC37A1P57057 533 aa18.17■□□□□ 0.5
SEC22A-208ENST00000487572 CEBPEQ15744 281 aa18.17■□□□□ 0.5
SEC22A-208ENST00000487572 ZNF628Q5EBL2 1059 aa18.17■□□□□ 0.5
SEC22A-208ENST00000487572 SLC29A4Q7RTT9 530 aa18.17■□□□□ 0.5
SEC22A-208ENST00000487572 LRRC34Q8IZ02 419 aa18.17■□□□□ 0.5
SEC22A-208ENST00000487572 LGI4Q8N135 537 aa18.17■□□□□ 0.5
SEC22A-208ENST00000487572 CATSPER1Q8NEC5 780 aa18.17■□□□□ 0.5
SEC22A-208ENST00000487572 MTERF3Q96E29 417 aa18.17■□□□□ 0.5
SEC22A-208ENST00000487572 THOC1Q96FV9 657 aaKnown RBP18.17■□□□□ 0.5
SEC22A-208ENST00000487572 OR52B2Q96RD2 323 aa18.17■□□□□ 0.5
SEC22A-208ENST00000487572 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.17■□□□□ 0.5
SEC22A-208ENST00000487572 OR10A5Q9H207 317 aa18.17■□□□□ 0.5
SEC22A-208ENST00000487572 SLAMF7Q9NQ25 335 aa18.17■□□□□ 0.5
SEC22A-208ENST00000487572 BCAP29Q9UHQ4 241 aa18.17■□□□□ 0.5
SEC22A-208ENST00000487572 FAM208BQ5VWN6 2430 aa18.17■□□□□ 0.5
SEC22A-208ENST00000487572 TMEM200CA6NKL6 621 aa18.16■□□□□ 0.5
SEC22A-208ENST00000487572 FCHO1O14526 889 aa18.16■□□□□ 0.5
SEC22A-208ENST00000487572 TBX19O60806 448 aa18.16■□□□□ 0.5
SEC22A-208ENST00000487572 ITGA10O75578 1167 aa18.16■□□□□ 0.5
SEC22A-208ENST00000487572 C1QL1O75973 258 aa18.16■□□□□ 0.5
SEC22A-208ENST00000487572 OR2J2O76002 312 aa18.16■□□□□ 0.5
SEC22A-208ENST00000487572 ALDOCP09972 364 aaKnown RBP18.16■□□□□ 0.5
SEC22A-208ENST00000487572 EFNA1P20827 205 aaPredicted RBP18.16■□□□□ 0.5
SEC22A-208ENST00000487572 PRPS1L1P21108 318 aa18.16■□□□□ 0.5
SEC22A-208ENST00000487572 RPL3P39023 403 aaKnown RBP18.16■□□□□ 0.5
SEC22A-208ENST00000487572 AQP5P55064 265 aa18.16■□□□□ 0.5
SEC22A-208ENST00000487572 NME5P56597 212 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms