RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 ZNF678Q5SXM1 525 aa13.3□□□□□ -0.28
CLDN11-207ENST00000486975 CCNYL2Q5T2Q4 361 aa13.3□□□□□ -0.28
CLDN11-207ENST00000486975 RPS27LQ71UM5 84 aaKnown RBP13.3□□□□□ -0.28
CLDN11-207ENST00000486975 COMMD6Q7Z4G1 85 aa13.3□□□□□ -0.28
CLDN11-207ENST00000486975 SLC22A9Q8IVM8 553 aa13.3□□□□□ -0.28
CLDN11-207ENST00000486975 GALNT12Q8IXK2 581 aa13.3□□□□□ -0.28
CLDN11-207ENST00000486975 ZNF441Q8N8Z8 693 aa13.3□□□□□ -0.28
CLDN11-207ENST00000486975 OR4K14Q8NGD5 310 aa13.3□□□□□ -0.28
CLDN11-207ENST00000486975 OR52N2Q8NGI0 321 aa13.3□□□□□ -0.28
CLDN11-207ENST00000486975 MZB1Q8WU39 189 aa13.3□□□□□ -0.28
CLDN11-207ENST00000486975 SELENOMQ8WWX9 145 aa13.3□□□□□ -0.28
CLDN11-207ENST00000486975 TP53INP1Q96A56 240 aa13.3□□□□□ -0.28
CLDN11-207ENST00000486975 ZNF382Q96SR6 550 aa13.3□□□□□ -0.28
CLDN11-207ENST00000486975 WWTR1Q9GZV5 400 aa13.3□□□□□ -0.28
CLDN11-207ENST00000486975 RUBCNLQ9H714 662 aa13.3□□□□□ -0.28
CLDN11-207ENST00000486975 PSMC3IPQ9P2W1 217 aaPredicted RBP13.3□□□□□ -0.28
CLDN11-207ENST00000486975 SLC12A4Q9UP95 1085 aa13.3□□□□□ -0.28
CLDN11-207ENST00000486975 STK38LQ9Y2H1 464 aa13.3□□□□□ -0.28
CLDN11-207ENST00000486975 PCNX1Q96RV3 2341 aa13.3□□□□□ -0.28
CLDN11-207ENST00000486975 C1orf226A1L170 272 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 OR14I1A6ND48 311 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 DLX3O60479 287 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 CDC40O60508 579 aaKnown RBP eCLIP13.29□□□□□ -0.28
CLDN11-207ENST00000486975 CLDN14O95500 239 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 PDYNP01213 254 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 KRT6AP02538 564 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 KRT6BP04259 564 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 TPOP07202 933 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 RHOXF2BP0C7M4 288 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 CCL3P10147 92 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 CPMP14384 443 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 IMPDH1P20839 514 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 GRNP28799 593 aaKnown RBP13.29□□□□□ -0.28
CLDN11-207ENST00000486975 SERPINB3P29508 390 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 KRT6CP48668 564 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 MAPK12P53778 367 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 TRA2BP62995 288 aaKnown RBP13.29□□□□□ -0.28
CLDN11-207ENST00000486975 PLGLB1Q02325 96 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 FUT7Q11130 342 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 GTF3C1Q12789 2109 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 CSTF3Q12996 717 aaKnown RBP13.29□□□□□ -0.28
CLDN11-207ENST00000486975 UNC50Q53HI1 259 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 SGO1Q5FBB7 561 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 SLC22A10Q63ZE4 541 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 SLC48A1Q6P1K1 146 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 FAM47EQ6ZV65 393 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 CD163Q86VB7 1156 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 FAM109AQ8N4B1 249 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 C17orf47Q8NEP4 570 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 SREK1Q8WXA9 508 aaKnown RBP13.29□□□□□ -0.28
CLDN11-207ENST00000486975 UCN3Q969E3 161 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 TRIM44Q96DX7 344 aaPredicted RBP13.29□□□□□ -0.28
CLDN11-207ENST00000486975 L3HYPDHQ96EM0 354 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 TMEM237Q96Q45 408 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 RHOXF2Q9BQY4 288 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 TP63Q9H3D4 680 aaPredicted RBP13.29□□□□□ -0.28
CLDN11-207ENST00000486975 FARSBQ9NSD9 589 aaKnown RBP13.29□□□□□ -0.28
CLDN11-207ENST00000486975 CNIH4Q9P003 139 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 CES1P1Q9UKY3 287 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 PCDHA9Q9Y5H5 950 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 MYO9AB2RTY4 2548 aa13.29□□□□□ -0.28
CLDN11-207ENST00000486975 CACNA1DQ01668 2161 aa13.28□□□□□ -0.28
CLDN11-207ENST00000486975 CELSR2Q9HCU4 2923 aa13.28□□□□□ -0.28
CLDN11-207ENST00000486975 A0A1B0GVC2 190 aa13.28□□□□□ -0.28
CLDN11-207ENST00000486975 ZNHIT1O43257 154 aa13.28□□□□□ -0.28
CLDN11-207ENST00000486975 SUPT7LO94864 414 aa13.28□□□□□ -0.28
CLDN11-207ENST00000486975 OR4F21O95013 312 aa13.28□□□□□ -0.28
CLDN11-207ENST00000486975 PORP16435 677 aaPredicted RBP13.28□□□□□ -0.28
CLDN11-207ENST00000486975 TSPAN8P19075 237 aa13.28□□□□□ -0.28
CLDN11-207ENST00000486975 PTGER4P35408 488 aa13.28□□□□□ -0.28
CLDN11-207ENST00000486975 DNASE1L1P49184 302 aa13.28□□□□□ -0.28
CLDN11-207ENST00000486975 XKP51811 444 aa13.28□□□□□ -0.28
CLDN11-207ENST00000486975 PRKAA2P54646 552 aa13.28□□□□□ -0.28
CLDN11-207ENST00000486975 NTRK2Q16620 822 aa13.28□□□□□ -0.28
CLDN11-207ENST00000486975 TEX35Q5T0J7 233 aa13.28□□□□□ -0.28
CLDN11-207ENST00000486975 GPRIN3Q6ZVF9 776 aa13.28□□□□□ -0.28
CLDN11-207ENST00000486975 TAGAPQ8N103 731 aa13.28□□□□□ -0.28
CLDN11-207ENST00000486975 FBXW8Q8N3Y1 598 aa13.28□□□□□ -0.28
CLDN11-207ENST00000486975 TMEM251Q8N6I4 163 aa13.28□□□□□ -0.28
CLDN11-207ENST00000486975 ZNF615Q8N8J6 731 aa13.28□□□□□ -0.28
CLDN11-207ENST00000486975 GBP7Q8N8V2 638 aaPredicted RBP13.28□□□□□ -0.28
CLDN11-207ENST00000486975 OR7G1Q8NGA0 311 aa13.28□□□□□ -0.28
CLDN11-207ENST00000486975 GAL3ST4Q96RP7 486 aa13.28□□□□□ -0.28
CLDN11-207ENST00000486975 DEFB127Q9H1M4 99 aa13.28□□□□□ -0.28
CLDN11-207ENST00000486975 PPCSQ9HAB8 311 aa13.28□□□□□ -0.28
CLDN11-207ENST00000486975 VPS29Q9UBQ0 182 aa13.28□□□□□ -0.28
CLDN11-207ENST00000486975 CHCHD2Q9Y6H1 151 aaPredicted RBP13.28□□□□□ -0.28
CLDN11-207ENST00000486975 ABCA12Q86UK0 2595 aa13.27□□□□□ -0.28
CLDN11-207ENST00000486975 C2orf92A0A1B0GVN3 265 aa13.27□□□□□ -0.29
CLDN11-207ENST00000486975 A0A1W2PS29 197 aa13.27□□□□□ -0.29
CLDN11-207ENST00000486975 ANKRD33BA6NCL7 494 aa13.27□□□□□ -0.29
CLDN11-207ENST00000486975 GOLGA6L10A6NI86 522 aa13.27□□□□□ -0.29
CLDN11-207ENST00000486975 FAM166BA8MTA8 275 aa13.27□□□□□ -0.29
CLDN11-207ENST00000486975 G3V3Y1 287 aa13.27□□□□□ -0.29
CLDN11-207ENST00000486975 MANBAO00462 879 aa13.27□□□□□ -0.29
CLDN11-207ENST00000486975 BCKDKO14874 412 aa13.27□□□□□ -0.29
CLDN11-207ENST00000486975 SUSD5O60279 629 aa13.27□□□□□ -0.29
CLDN11-207ENST00000486975 ATP1B1P05026 303 aa13.27□□□□□ -0.29
CLDN11-207ENST00000486975 SSTR4P31391 388 aa13.27□□□□□ -0.29
CLDN11-207ENST00000486975 MAGEA5P43359 124 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms