RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 C6orf52Q5T4I8 152 aa10.94□□□□□ -0.66
PRKCB-207ENST00000486868 CDC73Q6P1J9 531 aa10.94□□□□□ -0.66
PRKCB-207ENST00000486868 STK32CQ86UX6 486 aa10.94□□□□□ -0.66
PRKCB-207ENST00000486868 KRT73Q86Y46 540 aa10.94□□□□□ -0.66
PRKCB-207ENST00000486868 SLC35F3Q8IY50 421 aa10.94□□□□□ -0.66
PRKCB-207ENST00000486868 ZNF595Q8IYB9 648 aa10.94□□□□□ -0.66
PRKCB-207ENST00000486868 OR2L13Q8N349 312 aa10.94□□□□□ -0.66
PRKCB-207ENST00000486868 NUP43Q8NFH3 380 aa10.94□□□□□ -0.66
PRKCB-207ENST00000486868 GIMAP5Q96F15 307 aa10.94□□□□□ -0.66
PRKCB-207ENST00000486868 TMEM19Q96HH6 336 aa10.94□□□□□ -0.66
PRKCB-207ENST00000486868 MS4A4EQ96PG1 132 aa10.94□□□□□ -0.66
PRKCB-207ENST00000486868 TRNT1Q96Q11 434 aaKnown RBP10.94□□□□□ -0.66
PRKCB-207ENST00000486868 DPYSL5Q9BPU6 564 aa10.94□□□□□ -0.66
PRKCB-207ENST00000486868 PSD2Q9BQI7 771 aa10.94□□□□□ -0.66
PRKCB-207ENST00000486868 ACTRT3Q9BYD9 372 aa10.94□□□□□ -0.66
PRKCB-207ENST00000486868 KLHL25Q9H0H3 589 aa10.94□□□□□ -0.66
PRKCB-207ENST00000486868 OR51I1Q9H343 314 aa10.94□□□□□ -0.66
PRKCB-207ENST00000486868 REEP1Q9H902 201 aa10.94□□□□□ -0.66
PRKCB-207ENST00000486868 PNPLA3Q9NST1 481 aa10.94□□□□□ -0.66
PRKCB-207ENST00000486868 C3orf18Q9UK00 162 aa10.94□□□□□ -0.66
PRKCB-207ENST00000486868 C19orf53Q9UNZ5 99 aaPredicted RBP10.94□□□□□ -0.66
PRKCB-207ENST00000486868 MRPS33Q9Y291 106 aaKnown RBP10.94□□□□□ -0.66
PRKCB-207ENST00000486868 MRPS2Q9Y399 296 aaKnown RBP10.94□□□□□ -0.66
PRKCB-207ENST00000486868 NAALAD2Q9Y3Q0 740 aa10.94□□□□□ -0.66
PRKCB-207ENST00000486868 GPC6Q9Y625 555 aaPredicted RBP10.94□□□□□ -0.66
PRKCB-207ENST00000486868 SYNDIG1LA6NDD5 238 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 A6NHS1 94 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 GLOD5A6NK44 160 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 WASHC1A8K0Z3 465 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 E2F6O75461 281 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 PRKRAO75569 313 aaKnown RBP10.93□□□□□ -0.66
PRKCB-207ENST00000486868 ALBP02768 609 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 HMGN2P05204 90 aaKnown RBP10.93□□□□□ -0.66
PRKCB-207ENST00000486868 SLC35E2P0CK97 266 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 RNH1P13489 461 aaKnown RBP10.93□□□□□ -0.66
PRKCB-207ENST00000486868 RHCEP18577 417 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 CD247P20963 164 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 MLLT3P42568 568 aaPredicted RBP10.93□□□□□ -0.66
PRKCB-207ENST00000486868 KCNJ5P48544 419 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 GTF2A1P52655 376 aaPredicted RBP10.93□□□□□ -0.66
PRKCB-207ENST00000486868 IGLV3-21P80748 117 aaPredicted RBP10.93□□□□□ -0.66
PRKCB-207ENST00000486868 DUSP2Q05923 314 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 IL18R1Q13478 541 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 FAM214AQ32MH5 1076 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 ZNF628Q5EBL2 1059 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 HEPHL1Q6MZM0 1159 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 TNFAIP8L2Q6P589 184 aaPredicted RBP10.93□□□□□ -0.66
PRKCB-207ENST00000486868 TMEM154Q6P9G4 183 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 TBPL2Q6SJ96 375 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 VTCN1Q7Z7D3 282 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 MAML2Q8IZL2 1156 aaPredicted RBP10.93□□□□□ -0.66
PRKCB-207ENST00000486868 D2HGDHQ8N465 521 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 TTC29Q8NA56 475 aaPredicted RBP10.93□□□□□ -0.66
PRKCB-207ENST00000486868 OR9A2Q8NGT5 310 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 MAGEE2Q8TD90 523 aaPredicted RBP10.93□□□□□ -0.66
PRKCB-207ENST00000486868 APOBEC4Q8WW27 367 aaKnown RBP10.93□□□□□ -0.66
PRKCB-207ENST00000486868 AHCYL2Q96HN2 611 aaKnown RBP10.93□□□□□ -0.66
PRKCB-207ENST00000486868 SLC41A2Q96JW4 573 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 ZNF578Q96N58 590 aaPredicted RBP10.93□□□□□ -0.66
PRKCB-207ENST00000486868 ZNF300Q96RE9 604 aaPredicted RBP10.93□□□□□ -0.66
PRKCB-207ENST00000486868 PELOQ9BRX2 385 aaKnown RBP10.93□□□□□ -0.66
PRKCB-207ENST00000486868 SERHL2Q9H4I8 314 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 UBAP1Q9NZ09 502 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 NDUFAF4Q9P032 175 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 RAB23Q9ULC3 237 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 ENPP4Q9Y6X5 453 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 UNC80Q8N2C7 3258 aa10.93□□□□□ -0.66
PRKCB-207ENST00000486868 HYKKA2RU49 373 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 ARRDC5A6NEK1 342 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 TTC36A6NLP5 189 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 SYT5O00445 386 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 CASC3O15234 703 aaKnown RBP10.92□□□□□ -0.66
PRKCB-207ENST00000486868 SLC16A6O15403 523 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 B4GAT1O43505 415 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 CHST10O43529 356 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 FOXS1O43638 330 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 SLC28A2O43868 658 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 CTNSO60931 367 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 SDC3O75056 442 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 AK1P00568 194 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 BCHEP06276 602 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 OR12D1P0DN82 309 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 NR2F1P10589 423 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 CDH2P19022 906 aaPredicted RBP10.92□□□□□ -0.66
PRKCB-207ENST00000486868 MC3RP41968 323 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 XCR1P46094 333 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 GCGRP47871 477 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 AVPR1BP47901 424 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 HSD11B2P80365 405 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 SIM1P81133 766 aaPredicted RBP10.92□□□□□ -0.66
PRKCB-207ENST00000486868 MAP4K2Q12851 820 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 BNIP3Q12983 259 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 GPR19Q15760 415 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 ZNF528Q3MIS6 628 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 ATAD3BQ5T9A4 648 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 FHL5Q5TD97 284 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 KRT80Q6KB66 452 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 FAM180BQ6P0A1 224 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 TSSK4Q6SA08 328 aa10.92□□□□□ -0.66
PRKCB-207ENST00000486868 TMEM107Q6UX40 140 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms