RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 ATP13A5Q4VNC0 1218 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 GPAT3Q53EU6 434 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 ZNF789Q5FWF6 425 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 SAPCD1Q5SSQ6 148 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 EEF1A1P5Q5VTE0 462 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 ATG16L1Q676U5 607 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 NCBP2-AS2Q69YL0 99 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 NEPROQ6NW34 567 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 FBXO38Q6PIJ6 1188 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 IGFL2Q6UWQ7 119 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 RPTNQ6XPR3 784 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 SPNS3Q6ZMD2 512 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 IRF2BP2Q7Z5L9 587 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 MRGPRGQ86SM5 289 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 ASPGQ86U10 573 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 MAP7D3Q8IWC1 876 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 CADM3Q8N126 398 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 ZNF808Q8N4W9 903 aaPredicted RBP6.42□□□□□ -1.38
HDAC3-209ENST00000486618 GLB1L3Q8NCI6 653 aaPredicted RBP6.42□□□□□ -1.38
HDAC3-209ENST00000486618 ICA1LQ8NDH6 482 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 BHLHE23Q8NDY6 225 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 OR4E2Q8NGC2 313 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 PROKR1Q8TCW9 393 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 DTX3LQ8TDB6 740 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 LCN9Q8WX39 176 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 RHBDF1Q96CC6 855 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 NEIL1Q96FI4 390 aaPredicted RBP6.42□□□□□ -1.38
HDAC3-209ENST00000486618 MAGED4Q96JG8 741 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 ERGIC2Q96RQ1 377 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 OSBPL9Q96SU4 736 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 GORASP1Q9BQQ3 440 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 SYT11Q9BT88 431 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 TPPP3Q9BW30 176 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 FRMD8P1Q9BZ68 369 aaPredicted RBP6.42□□□□□ -1.38
HDAC3-209ENST00000486618 NUF2Q9BZD4 464 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 WWP1Q9H0M0 922 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 C12orf65Q9H3J6 166 aaKnown RBP6.42□□□□□ -1.38
HDAC3-209ENST00000486618 SRMSQ9H3Y6 488 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 ZBTB20Q9HC78 741 aaPredicted RBP6.42□□□□□ -1.38
HDAC3-209ENST00000486618 LMBRD1Q9NUN5 540 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 OLAHQ9NV23 265 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 ASH2LQ9UBL3 628 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 SLC7A8Q9UHI5 535 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 TMPRSS11EQ9UL52 423 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 CFAP20Q9Y6A4 193 aaKnown RBP6.42□□□□□ -1.38
HDAC3-209ENST00000486618 ABCA2Q9BZC7 2435 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 CACNA1CQ13936 2221 aa6.42□□□□□ -1.38
HDAC3-209ENST00000486618 ZFHX3Q15911 3703 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 NUP210LQ5VU65 1888 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 PCSK5Q92824 1860 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 A0A075B6Q4 140 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 A0A088AWK7 358 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 TMEM247A6NEH6 219 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 MGAT4DA6NG13 374 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 OR2AG2A6NM03 316 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 AQP7O14520 342 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 DNALI1O14645 258 aaPredicted RBP6.41□□□□□ -1.38
HDAC3-209ENST00000486618 RBBP9O75884 186 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 OR2B3O76000 313 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 SPDEFO95238 335 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 NDST3O95803 873 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 SNRPB2P08579 225 aaKnown RBP6.41□□□□□ -1.38
HDAC3-209ENST00000486618 CBSLP0DN79 551 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 TCF4P15884 667 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 ST6GAL1P15907 406 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 MSH3P20585 1137 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 CPN2P22792 545 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 PRDX3P30048 256 aaKnown RBP6.41□□□□□ -1.38
HDAC3-209ENST00000486618 SLC7A1P30825 629 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 CBSP35520 551 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 HMGCLP35914 325 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 CAPGP40121 348 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 CTSCP53634 463 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 ITGA9Q13797 1035 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 PDK2Q15119 407 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 PRKD1Q15139 912 aaPredicted RBP6.41□□□□□ -1.38
HDAC3-209ENST00000486618 ANKRD20A4Q4UJ75 823 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 PLAC9Q5JTB6 97 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 ANKRD20A2Q5SQ80 823 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 THEM4Q5T1C6 240 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 ANKRD20A1Q5TYW2 823 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 ANKRD20A3Q5VUR7 823 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 TXNRD3NBQ6F5E7 133 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 RHBDD2Q6NTF9 364 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 XKRXQ6PP77 449 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 SUSD1Q6UWL2 747 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 PPP1R32Q7Z5V6 425 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 NT5DC3Q86UY8 548 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 CILP2Q8IUL8 1156 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 RASGEF1AQ8N9B8 481 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 DDHD1Q8NEL9 900 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 ACVR1CQ8NER5 493 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 ITLN2Q8WWU7 325 aaPredicted RBP6.41□□□□□ -1.38
HDAC3-209ENST00000486618 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.41□□□□□ -1.384e-6■■■■■ 48.1
HDAC3-209ENST00000486618 IMP4Q96G21 291 aaKnown RBP6.41□□□□□ -1.38
HDAC3-209ENST00000486618 NSMCE2Q96MF7 247 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 TRIB3Q96RU7 358 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 CCM2Q9BSQ5 444 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 PITPNM3Q9BZ71 974 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 DRC3Q9H069 523 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms