RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 TNFRSF8P28908 595 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 SERPINB3P29508 390 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 PTGS2P35354 604 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 FOXA1P55317 472 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 PKNOX1P55347 436 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 SLC37A1P57057 533 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 IFFO1Q0D2I5 559 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 MPEG1Q2M385 716 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 SPRED3Q2MJR0 410 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 CCDC153Q494R4 210 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 PRAMEF20Q5VT98 475 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 SLC22A10Q63ZE4 541 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 ZFP62Q8NB50 900 aaPredicted RBP16.31■□□□□ 0.2
COL6A1-204ENST00000486023 C16orf52Q8NHV5 167 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 CDC26Q8NHZ8 85 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 AGAP11Q8TF27 550 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 CHTF18Q8WVB6 975 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 CCDC126Q96EE4 140 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 APIPQ96GX9 242 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 SGCZQ96LD1 299 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 JSRP1Q96MG2 331 aaPredicted RBP16.31■□□□□ 0.2
COL6A1-204ENST00000486023 FAIM2Q9BWQ8 316 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 EBPLQ9BY08 206 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 CXorf21Q9HAI6 301 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 PSME2Q9UL46 239 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 STK38LQ9Y2H1 464 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 ZNF780BQ9Y6R6 833 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 CENPEQ02224 2701 aa16.3■□□□□ 0.2
COL6A1-204ENST00000486023 GOLGA6L10A6NI86 522 aa16.3■□□□□ 0.2
COL6A1-204ENST00000486023 UBFD1O14562 309 aaKnown RBP16.3■□□□□ 0.2
COL6A1-204ENST00000486023 PCDH7O60245 1069 aa16.3■□□□□ 0.2
COL6A1-204ENST00000486023 PLIN3O60664 434 aa16.3■□□□□ 0.2
COL6A1-204ENST00000486023 CRHR1P34998 444 aa16.3■□□□□ 0.2
COL6A1-204ENST00000486023 KCNJ2P63252 427 aa16.3■□□□□ 0.2
COL6A1-204ENST00000486023 ACSM2AQ08AH3 577 aa16.3■□□□□ 0.2
COL6A1-204ENST00000486023 CSTF3Q12996 717 aaKnown RBP16.3■□□□□ 0.2
COL6A1-204ENST00000486023 IMPG1Q17R60 797 aa16.3■□□□□ 0.2
COL6A1-204ENST00000486023 CMPK2Q5EBM0 449 aa16.3■□□□□ 0.2
COL6A1-204ENST00000486023 ACSM2BQ68CK6 577 aa16.3■□□□□ 0.2
COL6A1-204ENST00000486023 SLC48A1Q6P1K1 146 aa16.3■□□□□ 0.2
COL6A1-204ENST00000486023 MTFR2Q6P444 385 aa16.3■□□□□ 0.2
COL6A1-204ENST00000486023 FAM111BQ6SJ93 734 aa16.3■□□□□ 0.2
COL6A1-204ENST00000486023 SH2D5Q6ZV89 423 aa16.3■□□□□ 0.2
COL6A1-204ENST00000486023 FGD2Q7Z6J4 655 aa16.3■□□□□ 0.2
COL6A1-204ENST00000486023 TDRPQ86YL5 185 aa16.3■□□□□ 0.2
COL6A1-204ENST00000486023 TAGAPQ8N103 731 aa16.3■□□□□ 0.2
COL6A1-204ENST00000486023 ADCY4Q8NFM4 1077 aa16.3■□□□□ 0.2
COL6A1-204ENST00000486023 FAM173AQ9BQD7 235 aa16.3■□□□□ 0.2
COL6A1-204ENST00000486023 TTTY12Q9BZ98 90 aa16.3■□□□□ 0.2
COL6A1-204ENST00000486023 ACPTQ9BZG2 426 aa16.3■□□□□ 0.2
COL6A1-204ENST00000486023 OR10A5Q9H207 317 aa16.3■□□□□ 0.2
COL6A1-204ENST00000486023 ZNF835Q9Y2P0 537 aa16.3■□□□□ 0.2
COL6A1-204ENST00000486023 NAV2Q8IVL1 2488 aa16.3■□□□□ 0.2
COL6A1-204ENST00000486023 DIDO1Q9BTC0 2240 aaKnown RBP16.29■□□□□ 0.2
COL6A1-204ENST00000486023 ATP6AP2A0A1C7CYW4 349 aa16.29■□□□□ 0.2
COL6A1-204ENST00000486023 CDH16O75309 829 aa16.29■□□□□ 0.2
COL6A1-204ENST00000486023 ATP6AP2O75787 350 aa16.29■□□□□ 0.2
COL6A1-204ENST00000486023 NADKO95544 446 aaPredicted RBP16.29■□□□□ 0.2
COL6A1-204ENST00000486023 CLPSP04118 112 aa16.29■□□□□ 0.2
COL6A1-204ENST00000486023 ENO1P06733 434 aaKnown RBP16.29■□□□□ 0.2
COL6A1-204ENST00000486023 IL3P08700 152 aa16.29■□□□□ 0.2
COL6A1-204ENST00000486023 HSD3B1P14060 373 aa16.29■□□□□ 0.2
COL6A1-204ENST00000486023 CSNK2A2P19784 350 aaPredicted RBP16.29■□□□□ 0.2
COL6A1-204ENST00000486023 HSD3B2P26439 372 aa16.29■□□□□ 0.2
COL6A1-204ENST00000486023 DCTP40126 519 aa16.29■□□□□ 0.2
COL6A1-204ENST00000486023 EXOSC7Q15024 291 aaKnown RBP16.29■□□□□ 0.2
COL6A1-204ENST00000486023 EBPQ15125 230 aaKnown RBP16.29■□□□□ 0.2
COL6A1-204ENST00000486023 ZNF791Q3KP31 576 aaPredicted RBP16.29■□□□□ 0.2
COL6A1-204ENST00000486023 SP5Q6BEB4 398 aaPredicted RBP16.29■□□□□ 0.2
COL6A1-204ENST00000486023 GK5Q6ZS86 529 aa16.29■□□□□ 0.2
COL6A1-204ENST00000486023 SLC22A16Q86VW1 577 aa16.29■□□□□ 0.2
COL6A1-204ENST00000486023 DOLPP1Q86YN1 238 aa16.29■□□□□ 0.2
COL6A1-204ENST00000486023 PRR22Q8IZ63 422 aa16.29■□□□□ 0.2
COL6A1-204ENST00000486023 CNPY4Q8N129 248 aa16.29■□□□□ 0.2
COL6A1-204ENST00000486023 GBP7Q8N8V2 638 aaPredicted RBP16.29■□□□□ 0.2
COL6A1-204ENST00000486023 GOLM1Q8NBJ4 401 aa16.29■□□□□ 0.2
COL6A1-204ENST00000486023 OR10G3Q8NGC4 313 aa16.29■□□□□ 0.2
COL6A1-204ENST00000486023 ITLN2Q8WWU7 325 aaPredicted RBP16.29■□□□□ 0.2
COL6A1-204ENST00000486023 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.29■□□□□ 0.2
COL6A1-204ENST00000486023 EXOSC8Q96B26 276 aaKnown RBP16.29■□□□□ 0.2
COL6A1-204ENST00000486023 SPACA9Q96E40 222 aaPredicted RBP16.29■□□□□ 0.2
COL6A1-204ENST00000486023 PHF12Q96QT6 1004 aa16.29■□□□□ 0.2
COL6A1-204ENST00000486023 IQCGQ9H095 443 aaKnown RBP16.29■□□□□ 0.2
COL6A1-204ENST00000486023 PPCSQ9HAB8 311 aa16.29■□□□□ 0.2
COL6A1-204ENST00000486023 TUBA8Q9NY65 449 aaPredicted RBP16.29■□□□□ 0.2
COL6A1-204ENST00000486023 UTS2RQ9UKP6 389 aa16.29■□□□□ 0.2
COL6A1-204ENST00000486023 CES1P1Q9UKY3 287 aa16.29■□□□□ 0.2
COL6A1-204ENST00000486023 DLGAP4Q9Y2H0 992 aa16.29■□□□□ 0.2
COL6A1-204ENST00000486023 FIS1Q9Y3D6 152 aa16.29■□□□□ 0.2
COL6A1-204ENST00000486023 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.29■□□□□ 0.2
COL6A1-204ENST00000486023 CROCCQ5TZA2 2017 aa16.28■□□□□ 0.2
COL6A1-204ENST00000486023 OR6C76A6NM76 312 aa16.28■□□□□ 0.2
COL6A1-204ENST00000486023 NPIPA2E9PIF3 369 aa16.28■□□□□ 0.2
COL6A1-204ENST00000486023 NPIPA3F8WFD2 350 aa16.28■□□□□ 0.2
COL6A1-204ENST00000486023 GALNSP34059 522 aa16.28■□□□□ 0.2
COL6A1-204ENST00000486023 MAGEA5P43359 124 aa16.28■□□□□ 0.2
COL6A1-204ENST00000486023 RAE1P78406 368 aaKnown RBP16.28■□□□□ 0.2
COL6A1-204ENST00000486023 NNATQ16517 81 aa16.28■□□□□ 0.2
COL6A1-204ENST00000486023 PAOXQ6QHF9 649 aa16.28■□□□□ 0.2
COL6A1-204ENST00000486023 CD163Q86VB7 1156 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms