RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 GOLGA8NF8WBI6 632 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 SDHDO14521 159 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 VPS4BO75351 444 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 WDPCPO95876 746 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 IGKV3-11P04433 115 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 ATP1B1P05026 303 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 PRPS2P11908 318 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 EPHA3P29320 983 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 NTSP30990 170 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 SSTR4P31391 388 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 GALNSP34059 522 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 HPCAL1P37235 193 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 MRPS35P82673 323 aaKnown RBP11.01□□□□□ -0.65
HPS4-214ENST00000485842 EMX2Q04743 252 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 PRSS53Q2L4Q9 553 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 SLC6A19Q695T7 634 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 NXNQ6DKJ4 435 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 FAM111BQ6SJ93 734 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 IGFL2Q6UWQ7 119 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 IGFL3Q6UXB1 125 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 C16orf47Q6ZP98 133 aaPredicted RBP11.01□□□□□ -0.65
HPS4-214ENST00000485842 WDR75Q8IWA0 830 aaKnown RBP11.01□□□□□ -0.65
HPS4-214ENST00000485842 C9orf40Q8IXQ3 194 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 CCDC116Q8IYX3 515 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 SAMD14Q8IZD0 417 aaPredicted RBP11.01□□□□□ -0.65
HPS4-214ENST00000485842 FAM9CQ8IZT9 166 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 VWA5B2Q8N398 1253 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 ZNF843Q8N446 348 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 PIWIL2Q8TC59 973 aaKnown RBP11.01□□□□□ -0.65
HPS4-214ENST00000485842 PPCDCQ96CD2 204 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 C7orf26Q96N11 449 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 ZNF681Q96N22 645 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 GAL3ST4Q96RP7 486 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.01□□□□□ -0.65
HPS4-214ENST00000485842 REEP4Q9H6H4 257 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 LIN28AQ9H9Z2 209 aaKnown RBP11.01□□□□□ -0.65
HPS4-214ENST00000485842 ANKRD10Q9NXR5 420 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 MAT2BQ9NZL9 334 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 NOP53Q9NZM5 478 aaKnown RBP11.01□□□□□ -0.65
HPS4-214ENST00000485842 SH3BP4Q9P0V3 963 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 SPTA1P02549 2419 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 COL6A6A6NMZ7 2263 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 OR5H15A6NDH6 313 aa11□□□□□ -0.65
HPS4-214ENST00000485842 SLCO1B7G3V0H7 640 aa11□□□□□ -0.65
HPS4-214ENST00000485842 WWP2O00308 870 aa11□□□□□ -0.65
HPS4-214ENST00000485842 FCHO1O14526 889 aa11□□□□□ -0.65
HPS4-214ENST00000485842 PDPK1O15530 556 aa11□□□□□ -0.65
HPS4-214ENST00000485842 ATP8B1O43520 1251 aa11□□□□□ -0.65
HPS4-214ENST00000485842 ITGA10O75578 1167 aa11□□□□□ -0.65
HPS4-214ENST00000485842 G6PDP11413 515 aa11□□□□□ -0.65
HPS4-214ENST00000485842 PCSK2P16519 638 aa11□□□□□ -0.65
HPS4-214ENST00000485842 LBPP18428 481 aa11□□□□□ -0.65
HPS4-214ENST00000485842 CASRP41180 1078 aa11□□□□□ -0.65
HPS4-214ENST00000485842 NCBP2P52298 156 aaKnown RBP eCLIP11□□□□□ -0.65
HPS4-214ENST00000485842 MLF1P58340 268 aa11□□□□□ -0.65
HPS4-214ENST00000485842 RNF4P78317 190 aa11□□□□□ -0.65
HPS4-214ENST00000485842 OC90Q02509 493 aaPredicted RBP11□□□□□ -0.65
HPS4-214ENST00000485842 EXOSC7Q15024 291 aaKnown RBP11□□□□□ -0.65
HPS4-214ENST00000485842 PRICKLE4Q2TBC4 344 aa11□□□□□ -0.65
HPS4-214ENST00000485842 ZNF385BQ569K4 471 aa11□□□□□ -0.65
HPS4-214ENST00000485842 SLC29A4Q7RTT9 530 aa11□□□□□ -0.65
HPS4-214ENST00000485842 PRICKLE2Q7Z3G6 844 aa11□□□□□ -0.65
HPS4-214ENST00000485842 MAVSQ7Z434 540 aa11□□□□□ -0.65
HPS4-214ENST00000485842 LGI4Q8N135 537 aa11□□□□□ -0.65
HPS4-214ENST00000485842 ARFGAP2Q8N6H7 521 aa11□□□□□ -0.65
HPS4-214ENST00000485842 KRTCAP2Q8N6L1 136 aa11□□□□□ -0.65
HPS4-214ENST00000485842 CATSPER1Q8NEC5 780 aa11□□□□□ -0.65
HPS4-214ENST00000485842 OR9A2Q8NGT5 310 aa11□□□□□ -0.65
HPS4-214ENST00000485842 KAT2AQ92830 837 aa11□□□□□ -0.65
HPS4-214ENST00000485842 MAGEB18Q96M61 343 aa11□□□□□ -0.65
HPS4-214ENST00000485842 UTP23Q9BRU9 249 aaKnown RBP11□□□□□ -0.65
HPS4-214ENST00000485842 WDR55Q9H6Y2 383 aaPredicted RBP11□□□□□ -0.65
HPS4-214ENST00000485842 BCAP29Q9UHQ4 241 aa11□□□□□ -0.65
HPS4-214ENST00000485842 B3GNT3Q9Y2A9 372 aa11□□□□□ -0.65
HPS4-214ENST00000485842 USH1CQ9Y6N9 552 aa11□□□□□ -0.65
HPS4-214ENST00000485842 CNTRLQ7Z7A1 2325 aa11□□□□□ -0.65
HPS4-214ENST00000485842 TMEM200CA6NKL6 621 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 MYO1GB0I1T2 1018 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 SCAMP2O15127 329 aaKnown RBP10.99□□□□□ -0.65
HPS4-214ENST00000485842 DIAPH2O60879 1101 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 OR2J2O76002 312 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 CLPSP04118 112 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 EFNA1P20827 205 aaPredicted RBP10.99□□□□□ -0.65
HPS4-214ENST00000485842 MPIP34949 423 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 RPL3P39023 403 aaKnown RBP10.99□□□□□ -0.65
HPS4-214ENST00000485842 SSR4P51571 173 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 DIO3P55073 304 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 SLC37A1P57057 533 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 MGAT2Q10469 447 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 FUT7Q11130 342 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 MAP4K2Q12851 820 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 TUBA3CQ13748 450 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 PDE7AQ13946 482 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 SMU1Q2TAY7 513 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 SLC9B1Q4ZJI4 515 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 ZNF628Q5EBL2 1059 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 ZNF468Q5VIY5 522 aaPredicted RBP10.99□□□□□ -0.65
HPS4-214ENST00000485842 HLA-DQA1Q5Y7H0 255 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 TUBA3EQ6PEY2 450 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 Q6ZS92 163 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms