RNA–Protein interactions for RNA: ENST00000485494.1

SFMBT1-206, Transcript of Scm like with four mbt domains 1, human

TSL 5

Gene SFMBT1, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFMBT1-206	ENST00000485494	CALML5	Q9NZT1	146 aa		12.1	□□□□□ -0.47
SFMBT1-206	ENST00000485494	C6orf203	Q9P0P8	240 aa	Predicted RBP	12.1	□□□□□ -0.47
SFMBT1-206	ENST00000485494	STOML1	Q9UBI4	398 aa		12.1	□□□□□ -0.47
SFMBT1-206	ENST00000485494	RPS6KA6	Q9UK32	745 aa		12.1	□□□□□ -0.47
SFMBT1-206	ENST00000485494	NXT1	Q9UKK6	140 aa	Known RBP	12.1	□□□□□ -0.47
SFMBT1-206	ENST00000485494	SAMD4A	Q9UPU9	718 aa	Known RBP	12.1	□□□□□ -0.47
SFMBT1-206	ENST00000485494	ERVK-11	Q9UQG0	969 aa		12.1	□□□□□ -0.47
SFMBT1-206	ENST00000485494	LIPT1	Q9Y234	373 aa		12.1	□□□□□ -0.47
SFMBT1-206	ENST00000485494	POLR1C	O15160	346 aa	Predicted RBP	12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	HNRNPR	O43390	633 aa	Known RBP	12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	CPNE3	O75131	537 aa	Known RBP	12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	COQ9	O75208	318 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	TNFRSF21	O75509	655 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	AK1	P00568	194 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	MYF5	P13349	255 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	SLC7A1	P30825	629 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	GCK	P35557	465 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	KHK	P50053	298 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	STX4	Q12846	297 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	MAP4K2	Q12851	820 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	HSPB3	Q12988	150 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	CCNI	Q14094	377 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	KCNAB1	Q14722	419 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	SF3A2	Q15428	464 aa	Known RBP	12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	GCNT6	Q5T4J0	391 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	PHF19	Q5T6S3	580 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	CDCP2	Q5VXM1	449 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	AP1AR	Q63HQ0	302 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	CEACAM20	Q6UY09	585 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	CCDC80	Q76M96	950 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	PRSS41	Q7RTY9	318 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	ZNF551	Q7Z340	670 aa	Predicted RBP	12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	TMPRSS9	Q7Z410	1059 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	C6orf120	Q7Z4R8	191 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	PIP4P1	Q86T03	277 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	PATL1	Q86TB9	770 aa	Known RBP	12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	CCDC116	Q8IYX3	515 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	LGI4	Q8N135	537 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	RNF148	Q8N7C7	305 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	SLC26A7	Q8TE54	656 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	NUDT8	Q8WV74	236 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	OIT3	Q8WWZ8	545 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	RSRC1	Q96IZ7	334 aa	Known RBP	12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	ART5	Q96L15	291 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	OR6C1	Q96RD1	312 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	ASPSCR1	Q9BZE9	553 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	IKZF5	Q9H5V7	419 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	S100A14	Q9HCY8	104 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	A4GALT	Q9NPC4	353 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	PRTFDC1	Q9NRG1	225 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	CCM2L	Q9NUG4	571 aa	Predicted RBP	12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	FAF1	Q9UNN5	650 aa	Predicted RBP	12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	C19orf53	Q9UNZ5	99 aa	Predicted RBP	12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	PCDHGA8	Q9Y5G5	932 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	SNX8	Q9Y5X2	465 aa		12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	CNOT1	A5YKK6	2376 aa	Known RBP	12.09	□□□□□ -0.47
SFMBT1-206	ENST00000485494	CXCR6	O00574	342 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	SCRG1	O75711	98 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	ARAF	P10398	606 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	TCN1	P20061	433 aa	Predicted RBP	12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	AGXT	P21549	392 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	SOAT1	P35610	550 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	CRAT	P43155	626 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	XCR1	P46094	333 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	STT3A	P46977	705 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	DSTN	P60981	165 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	SIM1	P81133	766 aa	Predicted RBP	12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	DCD	P81605	110 aa	Known RBP	12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	SLC13A2	Q13183	592 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	SELPLG	Q14242	412 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	PRSS53	Q2L4Q9	553 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	GTDC1	Q4AE62	458 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	ZNF628	Q5EBL2	1059 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	SPATA24	Q86W54	205 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	IFNE	Q86WN2	208 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	ZZZ3	Q8IYH5	903 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	MMP21	Q8N119	569 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	DTWD1	Q8N5C7	304 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	BMPER	Q8N8U9	685 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	PAPD5	Q8NDF8	572 aa	Known RBP	12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	HIPK4	Q8NE63	616 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	PLPP5	Q8NEB5	264 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	COL26A1	Q96A83	441 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	ANKRD9	Q96BM1	317 aa	Predicted RBP	12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	SLC35G5	Q96KT7	338 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	DEPDC7	Q96QD5	511 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	CSF3R	Q99062	836 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	STAC	Q99469	402 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	SPATA5L1	Q9BVQ7	753 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	DDA1	Q9BW61	102 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	BTBD2	Q9BX70	525 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	ACTRT3	Q9BYD9	372 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	VCX3B	Q9H321	246 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	WDR54	Q9H977	334 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	C8orf4	Q9NR00	106 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	ZCCHC3	Q9NUD5	404 aa	Known RBP	12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	DCAF13	Q9NV06	445 aa	Known RBP	12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	P2RX2	Q9UBL9	471 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	ANGPT4	Q9Y264	503 aa		12.08	□□□□□ -0.48
SFMBT1-206	ENST00000485494	CFL2	Q9Y281	166 aa		12.08	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms