RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 NXPE2Q96DL1 559 aa3.18□□□□□ -1.9
SMC4-215ENST00000484799 MRPL38Q96DV4 380 aaKnown RBP3.18□□□□□ -1.9
SMC4-215ENST00000484799 S1PR3Q99500 378 aa3.18□□□□□ -1.9
SMC4-215ENST00000484799 ABCG4Q9H172 646 aa3.18□□□□□ -1.9
SMC4-215ENST00000484799 RWDD1Q9H446 243 aaPredicted RBP3.18□□□□□ -1.9
SMC4-215ENST00000484799 KCNK13Q9HB14 408 aa3.18□□□□□ -1.9
SMC4-215ENST00000484799 C3orf14Q9HBI5 128 aa3.18□□□□□ -1.9
SMC4-215ENST00000484799 SATB2Q9UPW6 733 aa3.18□□□□□ -1.9
SMC4-215ENST00000484799 KIF3AQ9Y496 699 aa3.18□□□□□ -1.9
SMC4-215ENST00000484799 ZNF646O15015 1829 aaPredicted RBP3.18□□□□□ -1.9
SMC4-215ENST00000484799 FAM205AQ6ZU69 1335 aa3.18□□□□□ -1.9
SMC4-215ENST00000484799 A0A087WZ39 114 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 IGHV3-38A0A0C4DH36 116 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 A0A1B0GTH9 108 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 ATP6AP2A0A1C7CYW4 349 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 MTMR11A4FU01 709 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 ZNF732B4DXR9 585 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 ARPC1BO15143 372 aaKnown RBP3.17□□□□□ -1.9
SMC4-215ENST00000484799 GMNNO75496 209 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 CPNE6O95741 557 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 LMO2P25791 158 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 CAMLGP49069 296 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 TKTL1P51854 596 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 OR1D5P58170 312 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 SCGB2A2Q13296 93 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 GPR50Q13585 617 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 GCKRQ14397 625 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 KRT31Q15323 416 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 SPHARQ15513 63 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 TRADDQ15628 312 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 CARTPTQ16568 116 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 ATAD3CQ5T2N8 411 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 MARC1Q5VT66 337 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 PRAMEF7Q5VXH5 474 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 NKAIN2Q5VXU1 208 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 RNLSQ5VYX0 342 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 HIST2H2AA3Q6FI13 130 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 RAET1GQ6H3X3 334 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 IRGCQ6NXR0 463 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 UNC5DQ6UXZ4 953 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 RFPL4BQ6ZWI9 263 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 MCM10Q7L590 875 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 HSCBQ8IWL3 235 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 PRR22Q8IZ63 422 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 TEX26Q8N6G2 289 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 FAM71CQ8NEG0 241 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 TRPV3Q8NET8 790 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 OR13C5Q8NGS8 318 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 CASP10Q92851 521 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 GPR137Q96N19 417 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 PCDHB18PQ96TA0 734 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 SSX3Q99909 188 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 NTMT1Q9BV86 223 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 NUSAP1Q9BXS6 441 aaKnown RBP3.17□□□□□ -1.9
SMC4-215ENST00000484799 OCR1Q9BZK8 76 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 NMNAT2Q9BZQ4 307 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 NACA2Q9H009 215 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 MTIF3Q9H2K0 278 aaKnown RBP3.17□□□□□ -1.9
SMC4-215ENST00000484799 DPH5Q9H2P9 285 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 DCLRE1BQ9H816 532 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 MOB1AQ9H8S9 216 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 NGBQ9NPG2 151 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 VPS54Q9P1Q0 977 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 FAM153AQ9UHL3 310 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 NARFQ9UHQ1 456 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 ZNF256Q9Y2P7 627 aaPredicted RBP3.17□□□□□ -1.9
SMC4-215ENST00000484799 ETV7Q9Y603 341 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 AP1M2Q9Y6Q5 423 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 ATP8B3O60423 1300 aa3.17□□□□□ -1.9
SMC4-215ENST00000484799 ARHGEF33A8MVX0 844 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 K7EPI3 171 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 RTL8CO15255 209 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 TLX2O43763 284 aaPredicted RBP3.16□□□□□ -1.9
SMC4-215ENST00000484799 SAP30O75446 220 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 STBD1O95210 358 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 PDGFBP01127 241 aaPredicted RBP3.16□□□□□ -1.9
SMC4-215ENST00000484799 CHRNGP07510 517 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 NUDT17P0C025 328 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 HIST1H2AGP0C0S8 130 aaPredicted RBP3.16□□□□□ -1.9
SMC4-215ENST00000484799 RALAP11233 206 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 ODC1P11926 461 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 C4BPBP20851 252 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 ACKR3P25106 362 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 RPA1P27694 616 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 CHRNA3P32297 505 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 ACAA2P42765 397 aaKnown RBP3.16□□□□□ -1.9
SMC4-215ENST00000484799 TNFRSF4P43489 277 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 PPIAP62937 165 aaKnown RBP3.16□□□□□ -1.9
SMC4-215ENST00000484799 CDKL1Q00532 357 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 HSPA14Q0VDF9 509 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 CNTN1Q12860 1018 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 PDZK1IP1Q13113 114 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 MEF2DQ14814 521 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 EPC2Q52LR7 807 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 MPPE1Q53F39 396 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 C1orf189Q5VU69 101 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 C17orf107Q6ZR85 190 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 C17orf64Q86WR6 236 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.16□□□□□ -1.9
SMC4-215ENST00000484799 SLC43A2Q8N370 569 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms