RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 TRPV3Q8NET8 790 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 OR2A1Q8NGT9 310 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 C16orf78Q8WTQ4 265 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 FIG4Q92562 907 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 NCLNQ969V3 563 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 FAM162AQ96A26 154 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 RGMAQ96B86 450 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 COQ8BQ96D53 544 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 REXO5Q96IC2 774 aaKnown RBP6.54□□□□□ -1.36
BRCA1-216ENST00000484087 ZNF583Q96ND8 569 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 ZNF570Q96NI8 536 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 TEFMQ96QE5 360 aaKnown RBP6.54□□□□□ -1.36
BRCA1-216ENST00000484087 PKP2Q99959 881 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 CPPED1Q9BRF8 314 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-216ENST00000484087 TBCDQ9BTW9 1192 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 MS4A8Q9BY19 250 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 TRIM8Q9BZR9 551 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 SPNS1Q9H2V7 528 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 RAD21L1Q9H4I0 556 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 PIF1Q9H611 641 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 KAT8Q9H7Z6 458 aaKnown RBP6.54□□□□□ -1.36
BRCA1-216ENST00000484087 GORASP2Q9H8Y8 452 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 PDE7BQ9NP56 450 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 SERHLQ9NQF3 203 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 CUEDC1Q9NWM3 386 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-216ENST00000484087 SEMA5BQ9P283 1151 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 DHCR7Q9UBM7 475 aaKnown RBP6.54□□□□□ -1.36
BRCA1-216ENST00000484087 RIMS3Q9UJD0 308 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 ADAM29Q9UKF5 820 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 CNOT11Q9UKZ1 510 aaKnown RBP6.54□□□□□ -1.36
BRCA1-216ENST00000484087 VPS4AQ9UN37 437 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 MED13Q9UHV7 2174 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 CROCCQ5TZA2 2017 aa6.54□□□□□ -1.36
BRCA1-216ENST00000484087 TRBV5-3A0A0A0MS03 114 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 A0A0J9YY10 115 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 FEZF1A0PJY2 475 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 GABRR3A8MPY1 467 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 CLIC1O00299 241 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 CXCR6O00574 342 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 TXNDC9O14530 226 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 TOX3O15405 576 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-216ENST00000484087 NDUFS4O43181 175 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 CTSVO60911 334 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 DNAJB5O75953 348 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 ZCCHC18P0CG32 403 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 RAP2AP10114 183 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 LAMP1P11279 417 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 UQCRBP14927 111 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 NCK1P16333 377 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 TCN2P20062 427 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 CD82P27701 267 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 AHRP35869 848 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 GTF2A1P52655 376 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-216ENST00000484087 ARFIP1P53367 373 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 UCNP55089 124 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 OR4D2P58180 307 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 TAS2R50P59544 299 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 PHC1P78364 1004 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 ACY1Q03154 408 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 CDC20Q12834 499 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 SELPLGQ14242 412 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 KIR2DS3Q14952 304 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 TBR1Q16650 682 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 C4orf48Q5BLP8 95 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 CPZQ66K79 652 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 FCRL6Q6DN72 434 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 FRMPD2BQ6IN97 320 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 C6orf15Q6UXA7 325 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-216ENST00000484087 RNF111Q6ZNA4 994 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 FKBP9P1Q75LS8 142 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 PLD3Q8IV08 490 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 ADGRG5Q8IZF4 528 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 ZNF655Q8N720 491 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-216ENST00000484087 ANKRD53Q8N9V6 530 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 OR2L3Q8NG85 312 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 OR52E4Q8NGH9 312 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 OR4A15Q8NGL6 344 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 NUDT8Q8WV74 236 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-216ENST00000484087 LRTOMTQ8WZ04 291 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 HPS1Q92902 700 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 MR1Q95460 341 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 SDCCAG3Q96C92 435 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 CLIP3Q96DZ5 547 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 CENPNQ96H22 339 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-216ENST00000484087 RNF145Q96MT1 663 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 NR1H4Q96RI1 486 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-216ENST00000484087 UBL7Q96S82 380 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-216ENST00000484087 CD180Q99467 661 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 MESP1Q9BRJ9 268 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 INPP5KQ9BT40 448 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 BDH2Q9BUT1 245 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 C9orf16Q9BUW7 83 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 FAIM2Q9BWQ8 316 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 CHST8Q9H2A9 424 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 SLC6A20Q9NP91 592 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 LHX9Q9NQ69 397 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 BATF3Q9NR55 127 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 C1GALT1Q9NS00 363 aa6.53□□□□□ -1.36
BRCA1-216ENST00000484087 IRAK4Q9NWZ3 460 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms