RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 TOMM20Q15388 145 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 HSPB2Q16082 182 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 NTRK2Q16620 822 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 KBTBD12Q3ZCT8 623 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 EIPR1Q53HC9 387 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 FNDC7Q5VTL7 733 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 FBXW10Q5XX13 1052 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 DESI1Q6ICB0 168 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 PAMR1Q6UXH9 720 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 CCDC25Q86WR0 208 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 ST13P4Q8IZP2 240 aaPredicted RBP12.74□□□□□ -0.37
VARS-226ENST00000483275 ZNF441Q8N8Z8 693 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 WFDC11Q8NEX6 87 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 GOT1L1Q8NHS2 421 aaPredicted RBP12.74□□□□□ -0.37
VARS-226ENST00000483275 LINC01560Q8TB33 94 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 CDKL2Q92772 493 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 TANKQ92844 425 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 RNASE6Q93091 150 aaKnown RBP12.74□□□□□ -0.37
VARS-226ENST00000483275 UBE2E3Q969T4 207 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 NXNL1Q96CM4 212 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 MRRFQ96E11 262 aaKnown RBP12.74□□□□□ -0.37
VARS-226ENST00000483275 GNRHR2Q96P88 292 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 ACKR4Q9NPB9 350 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 DLL4Q9NR61 685 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 TEX10Q9NXF1 929 aaPredicted RBP12.74□□□□□ -0.37
VARS-226ENST00000483275 CNIH4Q9P003 139 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 ASB4Q9Y574 426 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 TLN2Q9Y4G6 2542 aa12.74□□□□□ -0.37
VARS-226ENST00000483275 FAM221AA4D161 298 aa12.73□□□□□ -0.37
VARS-226ENST00000483275 C2orf72A6NCS6 295 aa12.73□□□□□ -0.37
VARS-226ENST00000483275 FAM47E-STBD1D6RA91 191 aa12.73□□□□□ -0.37
VARS-226ENST00000483275 KERAO60938 352 aa12.73□□□□□ -0.37
VARS-226ENST00000483275 FAM58BPP0C7Q3 252 aa12.73□□□□□ -0.37
VARS-226ENST00000483275 MTHFD2P13995 350 aa12.73□□□□□ -0.37
VARS-226ENST00000483275 EPB42P16452 691 aa12.73□□□□□ -0.37
VARS-226ENST00000483275 CASQ1P31415 396 aa12.73□□□□□ -0.37
VARS-226ENST00000483275 CEACAM8P31997 349 aaPredicted RBP12.73□□□□□ -0.37
VARS-226ENST00000483275 BSGP35613 385 aa12.73□□□□□ -0.37
VARS-226ENST00000483275 SOX18P35713 384 aa12.73□□□□□ -0.37
VARS-226ENST00000483275 BUD31P41223 144 aaPredicted RBP12.73□□□□□ -0.37
VARS-226ENST00000483275 MASP1P48740 699 aa12.73□□□□□ -0.37
VARS-226ENST00000483275 ADAM8P78325 824 aa12.73□□□□□ -0.37
VARS-226ENST00000483275 RPS6KA2Q15349 733 aa12.73□□□□□ -0.37
VARS-226ENST00000483275 CPSF6Q16630 551 aaKnown RBP eCLIP12.73□□□□□ -0.37
VARS-226ENST00000483275 SPRED3Q2MJR0 410 aa12.73□□□□□ -0.37
VARS-226ENST00000483275 TBC1D1Q86TI0 1168 aaPredicted RBP12.73□□□□□ -0.37
VARS-226ENST00000483275 CENPLQ8N0S6 344 aaPredicted RBP12.73□□□□□ -0.37
VARS-226ENST00000483275 ZCCHC7Q8N3Z6 543 aaKnown RBP12.73□□□□□ -0.37
VARS-226ENST00000483275 SLC15A4Q8N697 577 aa12.73□□□□□ -0.37
VARS-226ENST00000483275 STAG3L4Q8TBR4 150 aa12.73□□□□□ -0.37
VARS-226ENST00000483275 TRIB1Q96RU8 372 aa12.73□□□□□ -0.37
VARS-226ENST00000483275 TIMP4Q99727 224 aa12.73□□□□□ -0.37
VARS-226ENST00000483275 EPB41L4BQ9H329 900 aa12.73□□□□□ -0.37
VARS-226ENST00000483275 ACTR8Q9H981 624 aa12.73□□□□□ -0.37
VARS-226ENST00000483275 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.73□□□□□ -0.37
VARS-226ENST00000483275 MS4A12Q9NXJ0 267 aa12.73□□□□□ -0.37
VARS-226ENST00000483275 GRHL1Q9NZI5 618 aa12.73□□□□□ -0.37
VARS-226ENST00000483275 DTX4Q9Y2E6 619 aa12.73□□□□□ -0.37
VARS-226ENST00000483275 ANGPTL3Q9Y5C1 460 aa12.73□□□□□ -0.37
VARS-226ENST00000483275 C2orf92A0A1B0GVN3 265 aa12.72□□□□□ -0.37
VARS-226ENST00000483275 GNB5O14775 395 aa12.72□□□□□ -0.37
VARS-226ENST00000483275 ATE1O95260 518 aa12.72□□□□□ -0.37
VARS-226ENST00000483275 SIX3O95343 332 aaPredicted RBP12.72□□□□□ -0.37
VARS-226ENST00000483275 EPPINO95925 133 aa12.72□□□□□ -0.37
VARS-226ENST00000483275 LTA4HP09960 611 aaKnown RBP12.72□□□□□ -0.37
VARS-226ENST00000483275 SERPINB1P30740 379 aa12.72□□□□□ -0.37
VARS-226ENST00000483275 TLX1P31314 330 aaPredicted RBP12.72□□□□□ -0.37
VARS-226ENST00000483275 CDK9P50750 372 aaKnown RBP12.72□□□□□ -0.37
VARS-226ENST00000483275 TRADDQ15628 312 aa12.72□□□□□ -0.37
VARS-226ENST00000483275 PFKFB4Q16877 469 aa12.72□□□□□ -0.37
VARS-226ENST00000483275 WIPI1Q5MNZ9 446 aaPredicted RBP12.72□□□□□ -0.37
VARS-226ENST00000483275 TMEM198Q66K66 360 aa12.72□□□□□ -0.37
VARS-226ENST00000483275 MRM1Q6IN84 353 aaKnown RBP12.72□□□□□ -0.37
VARS-226ENST00000483275 CYP20A1Q6UW02 462 aa12.72□□□□□ -0.37
VARS-226ENST00000483275 C3orf62Q6ZUJ4 267 aa12.72□□□□□ -0.37
VARS-226ENST00000483275 LACC1Q8IV20 430 aa12.72□□□□□ -0.37
VARS-226ENST00000483275 VWA5B2Q8N398 1253 aa12.72□□□□□ -0.37
VARS-226ENST00000483275 C9orf106Q8NAJ2 232 aa12.72□□□□□ -0.37
VARS-226ENST00000483275 SPPL2AQ8TCT8 520 aa12.72□□□□□ -0.37
VARS-226ENST00000483275 FAM222BQ8WU58 562 aa12.72□□□□□ -0.37
VARS-226ENST00000483275 CDK15Q96Q40 435 aa12.72□□□□□ -0.37
VARS-226ENST00000483275 ALPK1Q96QP1 1244 aa12.72□□□□□ -0.37
VARS-226ENST00000483275 CENPKQ9BS16 269 aa12.72□□□□□ -0.37
VARS-226ENST00000483275 UGT2B28Q9BY64 529 aa12.72□□□□□ -0.37
VARS-226ENST00000483275 UBQLN3Q9H347 655 aa12.72□□□□□ -0.37
VARS-226ENST00000483275 QPCTLQ9NXS2 382 aa12.72□□□□□ -0.37
VARS-226ENST00000483275 EHD3Q9NZN3 535 aa12.72□□□□□ -0.37
VARS-226ENST00000483275 RNF14Q9UBS8 474 aa12.72□□□□□ -0.37
VARS-226ENST00000483275 RPH3AQ9Y2J0 694 aaPredicted RBP12.72□□□□□ -0.37
VARS-226ENST00000483275 C15orf41Q9Y2V0 281 aa12.72□□□□□ -0.37
VARS-226ENST00000483275 RNF11Q9Y3C5 154 aa12.72□□□□□ -0.37
VARS-226ENST00000483275 JMJD1CQ15652 2540 aa12.72□□□□□ -0.37
VARS-226ENST00000483275 FN1P02751 2386 aaKnown RBP12.72□□□□□ -0.37
VARS-226ENST00000483275 CCDC188H7C350 402 aa12.71□□□□□ -0.37
VARS-226ENST00000483275 RAD51CO43502 376 aa12.71□□□□□ -0.37
VARS-226ENST00000483275 GFAPP14136 432 aa12.71□□□□□ -0.37
VARS-226ENST00000483275 DRD2P14416 443 aa12.71□□□□□ -0.37
VARS-226ENST00000483275 BMP7P18075 431 aa12.71□□□□□ -0.37
VARS-226ENST00000483275 SPRP35270 261 aaPredicted RBP12.71□□□□□ -0.37
VARS-226ENST00000483275 PIK3CBP42338 1070 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms