RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 SH3D21A4FU49 640 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 H7C1Q1 480 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 CES2O00748 559 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 SMAD7O15105 426 aaKnown RBP11.71□□□□□ -0.53
TMEM54-206ENST00000482771 OR10H2O60403 315 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 SMPD2O60906 423 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 ERN1O75460 977 aaKnown RBP11.71□□□□□ -0.53
TMEM54-206ENST00000482771 PRKRAO75569 313 aaKnown RBP11.71□□□□□ -0.53
TMEM54-206ENST00000482771 SCELO95171 688 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 GPR75O95800 540 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 CCDC166P0CW27 439 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 TMIGD3P0DMS9 266 aaPredicted RBP11.71□□□□□ -0.53
TMEM54-206ENST00000482771 EPORP19235 508 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 IVDP26440 423 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 NAGLUP54802 743 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 SLC12A2P55011 1212 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 EBPQ15125 230 aaKnown RBP11.71□□□□□ -0.53
TMEM54-206ENST00000482771 TBCCQ15814 346 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 NHSL2Q5HYW2 709 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 CDKL4Q5MAI5 379 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 DCST1Q5T197 706 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 FNDC7Q5VTL7 733 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 KHDRBS2Q5VWX1 349 aaKnown RBP11.71□□□□□ -0.53
TMEM54-206ENST00000482771 LUZP2Q86TE4 346 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 ST13P4Q8IZP2 240 aaPredicted RBP11.71□□□□□ -0.53
TMEM54-206ENST00000482771 RNF175Q8N4F7 328 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 LRRN4CLQ8ND94 238 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 SPPL2AQ8TCT8 520 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 SLC44A1Q8WWI5 657 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 UBE2E3Q969T4 207 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 ISL2Q96A47 359 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 RGMAQ96B86 450 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 CMTM7Q96FZ5 175 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 ANGPTL4Q9BY76 406 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 MOCS1Q9NZB8 636 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 EIF3LQ9Y262 564 aaKnown RBP11.71□□□□□ -0.53
TMEM54-206ENST00000482771 NPFFR2Q9Y5X5 522 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 GOLGA6L10A0A0M3HER8 536 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 GLOD5A6NK44 160 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 OR6C76A6NM76 312 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 GNB5O14775 395 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 PIAS1O75925 651 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 CASP3P42574 277 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 SLCO1A2P46721 670 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 CPA2P48052 419 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 PCDH1Q08174 1060 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 RCAN2Q14206 197 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 FRG1Q14331 258 aaKnown RBP11.7□□□□□ -0.54
TMEM54-206ENST00000482771 OR4D1Q15615 310 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 Q5PR19 223 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 HLA-DQA1Q5Y7H0 255 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 MED27Q6P2C8 311 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 YRDCQ86U90 279 aaKnown RBP11.7□□□□□ -0.54
TMEM54-206ENST00000482771 OR7G3Q8NG95 312 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 ZPLD1Q8TCW7 415 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 ACTRT1Q8TDG2 376 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 ZNF592Q92610 1267 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 UCN3Q969E3 161 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 TP53INP1Q96A56 240 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 LRRC39Q96DD0 335 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 COX4I2Q96KJ9 171 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 DOCK7Q96N67 2140 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 CD244Q9BZW8 370 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 DDX47Q9H0S4 455 aaKnown RBP11.7□□□□□ -0.54
TMEM54-206ENST00000482771 RHOJQ9H4E5 214 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 CAB39LQ9H9S4 337 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 POPDC3Q9HBV1 291 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 SNX15Q9NRS6 342 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 RYDENQ9NUL5 291 aaKnown RBP11.7□□□□□ -0.54
TMEM54-206ENST00000482771 TEX10Q9NXF1 929 aaPredicted RBP11.7□□□□□ -0.54
TMEM54-206ENST00000482771 GALNT8Q9NY28 637 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 C15orf41Q9Y2V0 281 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 MTO1Q9Y2Z2 717 aaKnown RBP11.7□□□□□ -0.54
TMEM54-206ENST00000482771 ZANQ9Y493 2812 aa11.7□□□□□ -0.54
TMEM54-206ENST00000482771 PHGDHO43175 533 aaKnown RBP11.69□□□□□ -0.54
TMEM54-206ENST00000482771 CLPSP04118 112 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 CYP4B1P13584 511 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 CD1DP15813 335 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 SSTR4P31391 388 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 SOX18P35713 384 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 RAP1GDS1P52306 607 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 HNRNPH2P55795 449 aaKnown RBP11.69□□□□□ -0.54
TMEM54-206ENST00000482771 POU4F1Q01851 419 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 TNFRSF17Q02223 184 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 SRYQ05066 204 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 DDX39BQ13838 428 aaKnown RBP11.69□□□□□ -0.54
TMEM54-206ENST00000482771 MORF4L2Q15014 288 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 SETDB1Q15047 1291 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 RPS6KA2Q15349 733 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 SPRED3Q2MJR0 410 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 TIGD3Q6B0B8 471 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 PLXDC2Q6UX71 529 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 CAPN12Q6ZSI9 719 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 LAS2Q8IYD9 372 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 PRR22Q8IZ63 422 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 LRRC75A-AS1Q8N1F1 130 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 ZNF441Q8N8Z8 693 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 SMPDL3BQ92485 455 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 PIGTQ969N2 578 aa11.69□□□□□ -0.54
TMEM54-206ENST00000482771 INTS12Q96CB8 462 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 233.3 ms