RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 GRIN2CQ14957 1233 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 SAXO2Q658L1 398 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 HSDL2Q6YN16 418 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 CCDC28AQ8IWP9 274 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 CHCHD4Q8N4Q1 142 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 RASGEF1AQ8N9B8 481 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 TEX12Q9BXU0 123 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 SPNS1Q9H2V7 528 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 CDCP1Q9H5V8 836 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 PRELID1Q9Y255 219 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 MYOFQ9NZM1 2061 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 MANSC4A6NHS7 340 aaPredicted RBP12.07□□□□□ -0.48
VPS52-218ENST00000482399 RNASET2O00584 256 aaKnown RBP12.07□□□□□ -0.48
VPS52-218ENST00000482399 TSPAN4O14817 238 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 ALX3O95076 343 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 XCR1P46094 333 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 RAE1P78406 368 aaKnown RBP12.07□□□□□ -0.48
VPS52-218ENST00000482399 FCHO2Q0JRZ9 810 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 MAB21L1Q13394 359 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 DOC2BQ14184 412 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 C9orf64Q5T6V5 341 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 FAM205BPQ63HN1 556 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 ACSM5Q6NUN0 579 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 PODNL1Q6PEZ8 512 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 MSANTD1Q6ZTZ1 278 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 CCDC149Q6ZUS6 474 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 MRPL15Q9P015 296 aaKnown RBP12.07□□□□□ -0.48
VPS52-218ENST00000482399 HCN2Q9UL51 889 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 CSNK1G3Q9Y6M4 447 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 HNRNPCL2B2RXH8 293 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 CCL16O15467 120 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 EEF1E1O43324 174 aaKnown RBP12.06□□□□□ -0.48
VPS52-218ENST00000482399 RB1P06400 928 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 POLR2EP19388 210 aaKnown RBP12.06□□□□□ -0.48
VPS52-218ENST00000482399 DDOSTP39656 456 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 SLC3A1Q07837 685 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 FAPQ12884 760 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 SMUG1Q53HV7 270 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 WDR45BQ5MNZ6 344 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 ZNF697Q5TEC3 545 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 ATCAYQ86WG3 371 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 PLPP6Q8IY26 295 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 LRRC20Q8TCA0 184 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 MSANTD3Q96H12 275 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 ABCG5Q9H222 651 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 FBXW2Q9UKT8 454 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 A3GALT2U3KPV4 340 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 ZAR1LA6NP61 321 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 ADAMTS4O75173 837 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 MRPL3P09001 348 aaKnown RBP12.06□□□□□ -0.48
VPS52-218ENST00000482399 GPR4P46093 362 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 FGFBP1Q14512 234 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 GGTA1PQ4G0N0 100 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 Q5BKY6 102 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 XKRXQ6PP77 449 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 C17orf99Q6UX52 265 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 C17orf64Q86WR6 236 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 SAMD12Q8N8I0 201 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 OR10H4Q8NGA5 316 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 WDR20Q8TBZ3 569 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 SLC5A11Q8WWX8 675 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 SMG7Q92540 1137 aaKnown RBP12.06□□□□□ -0.48
VPS52-218ENST00000482399 CASD1Q96PB1 797 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 SECISBP2Q96T21 854 aaKnown RBP12.06□□□□□ -0.48
VPS52-218ENST00000482399 BHLHE41Q9C0J9 482 aaPredicted RBP12.06□□□□□ -0.48
VPS52-218ENST00000482399 C3orf14Q9HBI5 128 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 C1GALT1Q9NS00 363 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 CNOT2Q9NZN8 540 aaKnown RBP12.06□□□□□ -0.48
VPS52-218ENST00000482399 MGAT4BQ9UQ53 548 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 FAM170BA6NMN3 283 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 ADAP00813 363 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 FURINP09958 794 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 C1GALT1C1LP0DN25 315 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 SELPP16109 830 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 ALAS2P22557 587 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 ERP29P30040 261 aaKnown RBP12.06□□□□□ -0.48
VPS52-218ENST00000482399 HOXC8P31273 242 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 ST8SIA6P61647 398 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 PUM1Q14671 1186 aaKnown RBP eCLIP12.06□□□□□ -0.48
VPS52-218ENST00000482399 FAM209AQ5JX71 171 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 UNC5DQ6UXZ4 953 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 IFNL1Q8IU54 200 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 BBS10Q8TAM1 723 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 ZNF431Q8TF32 576 aaPredicted RBP12.06□□□□□ -0.48
VPS52-218ENST00000482399 FAM46AQ96IP4 442 aaKnown RBP12.06□□□□□ -0.48
VPS52-218ENST00000482399 C17orf62Q9BQA9 187 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 CDCA4Q9BXL8 241 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 MRPL9Q9BYD2 267 aaKnown RBP12.06□□□□□ -0.48
VPS52-218ENST00000482399 SPATA6Q9NWH7 488 aaPredicted RBP12.06□□□□□ -0.48
VPS52-218ENST00000482399 V9GYH0 126 aa12.06□□□□□ -0.48
VPS52-218ENST00000482399 DOCK4Q8N1I0 1966 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 TRBV5-4A0A0C4DH59 114 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 C1orf226A1L170 272 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 H3BSH0 61 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 TMEM189-UBE2V1I3L0A0 370 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 ATF4P18848 351 aaPredicted RBP12.05□□□□□ -0.48
VPS52-218ENST00000482399 ELAVL4P26378 380 aaKnown RBP12.05□□□□□ -0.48
VPS52-218ENST00000482399 MTNR1AP48039 350 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 GIPRP48546 466 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 TCTN3Q6NUS6 607 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms