RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 STK19P49842 368 aaPredicted RBP3.83□□□□□ -1.8
VPS41-212ENST00000482217 SERPINB9P50453 376 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 CCL11P51671 97 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 CDH6P55285 790 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 MTCP1P56278 107 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 PRPS1P60891 318 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 YWHAGP61981 247 aaKnown RBP eCLIP3.83□□□□□ -1.8
VPS41-212ENST00000482217 DSC1Q08554 894 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 FGL1Q08830 312 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 PJVKQ0ZLH3 352 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 HYAL1Q12794 435 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 SLAMF1Q13291 335 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 KRT33BQ14525 404 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 ZNF268Q14587 947 aaPredicted RBP3.83□□□□□ -1.8
VPS41-212ENST00000482217 C18orf21Q32NC0 220 aaPredicted RBP3.83□□□□□ -1.8
VPS41-212ENST00000482217 CTSL3PQ5NE16 218 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 PRAMEF19Q5SWL8 479 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 FAM171BQ6P995 826 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 FIGLAQ6QHK4 219 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 UQCC3Q6UW78 93 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 LCTLQ6UWM7 567 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 FAM159AQ6UWV7 190 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 PLXDC2Q6UX71 529 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 ZNF782Q6ZMW2 699 aaPredicted RBP3.83□□□□□ -1.8
VPS41-212ENST00000482217 FAM122BQ7Z309 247 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 C16orf62Q7Z3J2 963 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 TMPRSS12Q86WS5 348 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 NAGSQ8N159 534 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 ARHGAP24Q8N264 748 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 ZNF786Q8N393 782 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 GALNT16Q8N428 558 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 ARFGAP1Q8N6T3 406 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 SCAIQ8N9R8 606 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 ENGASEQ8NFI3 743 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 OR51L1Q8NGJ5 315 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 TRMT10AQ8TBZ6 339 aaKnown RBP3.83□□□□□ -1.8
VPS41-212ENST00000482217 MARCH1Q8TCQ1 289 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 ELMO1Q92556 727 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 CIDECQ96AQ7 238 aaPredicted RBP3.83□□□□□ -1.8
VPS41-212ENST00000482217 SENP5Q96HI0 755 aaPredicted RBP3.83□□□□□ -1.8
VPS41-212ENST00000482217 ACOX2Q99424 681 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 DDOQ99489 341 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 RIT2Q99578 217 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 ST6GALNAC5Q9BVH7 336 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 FNDC11Q9BVV2 318 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 FTHL17Q9BXU8 183 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 DERL2Q9GZP9 239 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 DHX33Q9H6R0 707 aaKnown RBP3.83□□□□□ -1.8
VPS41-212ENST00000482217 COG4Q9H9E3 785 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 ELOVL3Q9HB03 270 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 TREX1Q9NSU2 369 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 MED17Q9NVC6 651 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 TAS2R7Q9NYW3 318 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 ADA2Q9NZK5 511 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 SLC17A7Q9P2U7 560 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 RHCGQ9UBD6 479 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 ASIC3Q9UHC3 531 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 CLEC2DQ9UHP7 191 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 LCMT1Q9UIC8 334 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 ZNF639Q9UID6 485 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 EXOGQ9Y2C4 368 aaKnown RBP3.83□□□□□ -1.8
VPS41-212ENST00000482217 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.83□□□□□ -1.8
VPS41-212ENST00000482217 FAM96BQ9Y3D0 163 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 SAMHD1Q9Y3Z3 626 aaKnown RBP3.83□□□□□ -1.8
VPS41-212ENST00000482217 CSDC2Q9Y534 153 aaKnown RBP3.83□□□□□ -1.8
VPS41-212ENST00000482217 LRP12Q9Y561 859 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 PTGDR2Q9Y5Y4 395 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 CEPT1Q9Y6K0 416 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 UMODL1Q5DID0 1318 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 WDR17Q8IZU2 1322 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 RAB19A4D1S5 217 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 SNTNA6NMZ2 147 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 HEPACAM2A8MVW5 462 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 NPIPA2E9PIF3 369 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 PPIAL4DF5H284 164 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 PRAMEF26H0Y7S4 382 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 PDLIM1O00151 329 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 TRAFD1O14545 582 aaPredicted RBP3.82□□□□□ -1.8
VPS41-212ENST00000482217 TIMM8AO60220 97 aaPredicted RBP3.82□□□□□ -1.8
VPS41-212ENST00000482217 PRAMEF11O60813 436 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 SDC3O75056 442 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 AHSA1O95433 338 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 ZBTB11O95625 1053 aaPredicted RBP3.82□□□□□ -1.8
VPS41-212ENST00000482217 CST1P01037 141 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 IFNA14P01570 189 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 IL6P05231 212 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 ERCC1P07992 297 aaPredicted RBP3.82□□□□□ -1.8
VPS41-212ENST00000482217 PLEKP08567 350 aaPredicted RBP3.82□□□□□ -1.8
VPS41-212ENST00000482217 F7P08709 466 aaPredicted RBP3.82□□□□□ -1.8
VPS41-212ENST00000482217 RAB40ALP0C0E4 278 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 RD3LP0DJH9 198 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 MCF2P10911 925 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 IRF1P10914 325 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 VPREB1P12018 145 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 CTRB1P17538 263 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 UBA1P22314 1058 aaKnown RBP3.82□□□□□ -1.8
VPS41-212ENST00000482217 MSNP26038 577 aaKnown RBP3.82□□□□□ -1.8
VPS41-212ENST00000482217 EPHX2P34913 555 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 KIR3DL2P43630 455 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 NSFP46459 744 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms