RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 CETN1Q12798 172 aa3□□□□□ -1.93
COPA-204ENST00000481522 GRB14Q14449 540 aa3□□□□□ -1.93
COPA-204ENST00000481522 GLIPR1L2Q4G1C9 344 aa3□□□□□ -1.93
COPA-204ENST00000481522 DDX59Q5T1V6 619 aaKnown RBP eCLIP3□□□□□ -1.93
COPA-204ENST00000481522 C15orf52Q6ZUT6 534 aaKnown RBP3□□□□□ -1.93
COPA-204ENST00000481522 TEX26Q8N6G2 289 aa3□□□□□ -1.93
COPA-204ENST00000481522 OR2L2Q8NH16 312 aa3□□□□□ -1.93
COPA-204ENST00000481522 C11orf45Q8TAV5 145 aa3□□□□□ -1.93
COPA-204ENST00000481522 MIPOL1Q8TD10 442 aa3□□□□□ -1.93
COPA-204ENST00000481522 LSG1Q9H089 658 aaKnown RBP3□□□□□ -1.93
COPA-204ENST00000481522 PRORYQ9H606 182 aa3□□□□□ -1.93
COPA-204ENST00000481522 ZWILCHQ9H900 591 aa3□□□□□ -1.93
COPA-204ENST00000481522 RAB9BQ9NP90 201 aa3□□□□□ -1.93
COPA-204ENST00000481522 TMOD3Q9NYL9 352 aa3□□□□□ -1.93
COPA-204ENST00000481522 BAIAP2L1Q9UHR4 511 aa3□□□□□ -1.93
COPA-204ENST00000481522 PLCL2Q9UPR0 1127 aa3□□□□□ -1.93
COPA-204ENST00000481522 ZHX2Q9Y6X8 837 aa3□□□□□ -1.93
COPA-204ENST00000481522 KIF26AQ9ULI4 1882 aaPredicted RBP3□□□□□ -1.93
COPA-204ENST00000481522 POLR3AO14802 1390 aaPredicted RBP3□□□□□ -1.93
COPA-204ENST00000481522 ATG2AQ2TAZ0 1938 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 GRIN2DO15399 1336 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 PCNX3Q9H6A9 2034 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 C2orf92A0A1B0GVN3 265 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 ILVBLA1L0T0 632 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 EPM2AB3EWF7 344 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 TCP10L2B9ZVM9 353 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 KBTBD13C9JR72 458 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 G3V2L1 256 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 RTCAO00442 366 aaKnown RBP2.99□□□□□ -1.93
COPA-204ENST00000481522 TLX2O43763 284 aaPredicted RBP2.99□□□□□ -1.93
COPA-204ENST00000481522 KINO60870 393 aaKnown RBP2.99□□□□□ -1.93
COPA-204ENST00000481522 MTRF1O75570 445 aaKnown RBP2.99□□□□□ -1.93
COPA-204ENST00000481522 NXPH4O95158 308 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 DLATP10515 647 aaKnown RBP2.99□□□□□ -1.93
COPA-204ENST00000481522 KRT3P12035 628 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 GOT1P17174 413 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 PIK3R1P27986 724 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 SHC1P29353 583 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 ERVK-16P61578 105 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 SCARB2Q14108 478 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 ZNF239Q16600 458 aaKnown RBP2.99□□□□□ -1.93
COPA-204ENST00000481522 MS4A18Q3C1V0 323 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 ARMCX4Q5H9R4 360 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 GPRIN3Q6ZVF9 776 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 TRMT11Q7Z4G4 463 aaKnown RBP2.99□□□□□ -1.93
COPA-204ENST00000481522 ANKRD46Q86W74 232 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 OR8H3Q8N146 312 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 NHLRC2Q8NBF2 726 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 ATAD1Q8NBU5 361 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 OR9Q2Q8NGE9 314 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 OR52B6Q8NGF0 335 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 AFAP1L1Q8TED9 768 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 MR1Q95460 341 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 GAL3ST4Q96RP7 486 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 ADPGKQ9BRR6 497 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 ATG101Q9BSB4 218 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 MLPHQ9BV36 600 aaPredicted RBP2.99□□□□□ -1.93
COPA-204ENST00000481522 PARLQ9H300 379 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 C3orf14Q9HBI5 128 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 SLC7A10Q9NS82 523 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 ARMCX3Q9UH62 379 aaPredicted RBP2.99□□□□□ -1.93
COPA-204ENST00000481522 GTF3C4Q9UKN8 822 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 CDH7Q9ULB5 785 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 SATB2Q9UPW6 733 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 OTOFQ9HC10 1997 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 ATG2BQ96BY7 2078 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 CCNB3Q8WWL7 1395 aa2.99□□□□□ -1.93
COPA-204ENST00000481522 MAP1AP78559 2803 aaPredicted RBP2.98□□□□□ -1.93
COPA-204ENST00000481522 NEDD4P46934 1319 aa2.98□□□□□ -1.93
COPA-204ENST00000481522 IGHV4-30-2A0A087WSY4 118 aa2.98□□□□□ -1.93
COPA-204ENST00000481522 OOEPA6NGQ2 149 aa2.98□□□□□ -1.93
COPA-204ENST00000481522 A8MXK9 166 aa2.98□□□□□ -1.93
COPA-204ENST00000481522 RNF103O00237 685 aa2.98□□□□□ -1.93
COPA-204ENST00000481522 TRAFD1O14545 582 aaPredicted RBP2.98□□□□□ -1.93
COPA-204ENST00000481522 CTDSPLO15194 276 aa2.98□□□□□ -1.93
COPA-204ENST00000481522 ST8SIA3O43173 380 aa2.98□□□□□ -1.93
COPA-204ENST00000481522 SCO2O43819 266 aa2.98□□□□□ -1.93
COPA-204ENST00000481522 ECE2O60344 883 aa2.98□□□□□ -1.93
COPA-204ENST00000481522 SLU7O95391 586 aaKnown RBP2.98□□□□□ -1.93
COPA-204ENST00000481522 HPRP00739 348 aa2.98□□□□□ -1.93
COPA-204ENST00000481522 CCND3P30281 292 aaPredicted RBP2.98□□□□□ -1.93
COPA-204ENST00000481522 OXTRP30559 389 aa2.98□□□□□ -1.93
COPA-204ENST00000481522 PKLRP30613 574 aa2.98□□□□□ -1.93
COPA-204ENST00000481522 FEN1P39748 380 aaKnown RBP2.98□□□□□ -1.93
COPA-204ENST00000481522 CAPGP40121 348 aa2.98□□□□□ -1.93
COPA-204ENST00000481522 SLC1A3P43003 542 aa2.98□□□□□ -1.93
COPA-204ENST00000481522 IER3P46695 156 aa2.98□□□□□ -1.93
COPA-204ENST00000481522 NOVA1P51513 510 aaKnown RBP2.98□□□□□ -1.93
COPA-204ENST00000481522 NDST2P52849 883 aa2.98□□□□□ -1.93
COPA-204ENST00000481522 RPP38P78345 283 aaKnown RBP2.98□□□□□ -1.93
COPA-204ENST00000481522 PAX8Q06710 450 aa2.98□□□□□ -1.93
COPA-204ENST00000481522 ABRQ12979 859 aa2.98□□□□□ -1.93
COPA-204ENST00000481522 KIAA0141Q14154 515 aaPredicted RBP2.98□□□□□ -1.93
COPA-204ENST00000481522 LRRC37A5PQ49AS3 106 aa2.98□□□□□ -1.93
COPA-204ENST00000481522 ZRANB3Q5FWF4 1079 aa2.98□□□□□ -1.93
COPA-204ENST00000481522 SPANXN4Q5MJ08 99 aa2.98□□□□□ -1.93
COPA-204ENST00000481522 HECTD3Q5T447 861 aa2.98□□□□□ -1.93
COPA-204ENST00000481522 SPINK14Q6IE38 97 aa2.98□□□□□ -1.93
COPA-204ENST00000481522 TCEAL6Q6IPX3 200 aa2.98□□□□□ -1.93
COPA-204ENST00000481522 ZNF770Q6IQ21 691 aaPredicted RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms