RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 OR2L2Q8NH16 312 aa9.04□□□□□ -0.96
GARNL3-216ENST00000481242 TRUB1Q8WWH5 349 aaKnown RBP9.04□□□□□ -0.96
GARNL3-216ENST00000481242 NXPE2Q96DL1 559 aa9.04□□□□□ -0.96
GARNL3-216ENST00000481242 SGTBQ96EQ0 304 aa9.04□□□□□ -0.96
GARNL3-216ENST00000481242 PIP5K1AQ99755 562 aa9.04□□□□□ -0.96
GARNL3-216ENST00000481242 RTP3Q9BQQ7 232 aa9.04□□□□□ -0.96
GARNL3-216ENST00000481242 ZBP1Q9H171 429 aa9.04□□□□□ -0.96
GARNL3-216ENST00000481242 NKX1-2Q9UD57 310 aaPredicted RBP9.04□□□□□ -0.96
GARNL3-216ENST00000481242 CDH10Q9Y6N8 788 aa9.04□□□□□ -0.96
GARNL3-216ENST00000481242 PKD1L3Q7Z443 1732 aa9.04□□□□□ -0.96
GARNL3-216ENST00000481242 SCAMP2O15127 329 aaKnown RBP9.03□□□□□ -0.96
GARNL3-216ENST00000481242 DNAJB5O75953 348 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 ERCC1P07992 297 aaPredicted RBP9.03□□□□□ -0.96
GARNL3-216ENST00000481242 FGF4P08620 206 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 CLUP10909 449 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 GLP1RP43220 463 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 EMP2P54851 167 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 CDKN2DP55273 166 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 CDK3Q00526 305 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 MLLT1Q03111 559 aaPredicted RBP9.03□□□□□ -0.96
GARNL3-216ENST00000481242 EFR3AQ14156 821 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 ZNF542PQ5EBM4 170 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 ISCA2Q86U28 154 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 PLCZ1Q86YW0 608 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 FANK1Q8TC84 345 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 HAVCR2Q8TDQ0 301 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 SLC39A13Q96H72 371 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 SYT11Q9BT88 431 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 CRB3Q9BUF7 120 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 MED28Q9H204 178 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 MAGIXQ9H6Y5 334 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 CWH43Q9H720 699 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 SACM1LQ9NTJ5 587 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 ACTR10Q9NZ32 417 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 ZNF639Q9UID6 485 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 PCTPQ9UKL6 214 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 C4AP0C0L4 1744 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 ZCWPW2A0A1B0GU75 182 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 A8MVJ9 347 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 H3BNC9 293 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 ZNF701M0R085 212 aaPredicted RBP9.03□□□□□ -0.96
GARNL3-216ENST00000481242 TNFRSF10AO00220 468 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 PHYHO14832 338 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 SRPX2O60687 465 aaPredicted RBP9.03□□□□□ -0.96
GARNL3-216ENST00000481242 HPRP00739 348 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 ITGA5P08648 1049 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 IDNKQ5T6J7 187 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 DUS1LQ6P1R4 473 aaKnown RBP9.03□□□□□ -0.96
GARNL3-216ENST00000481242 BLOC1S3Q6QNY0 202 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 MAMDC2Q7Z304 686 aaPredicted RBP9.03□□□□□ -0.96
GARNL3-216ENST00000481242 PARP8Q8N3A8 854 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 OR52N2Q8NGI0 321 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 OR8J1Q8NGP2 316 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 TMEM80Q96HE8 168 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 ACTRT3Q9BYD9 372 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 HPF1Q9NWY4 346 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 RGPD2P0DJD1 1756 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 LOC285095A0A1B0GVY8 99 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 GXYLT2A0PJZ3 443 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 TMEM221A6NGB7 291 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 ACOX3O15254 700 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 TBX1O43435 398 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 SCO2O43819 266 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 MMP2P08253 660 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 CDKL1Q00532 357 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 ZNF252P-AS1Q0IIN9 211 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 FAPQ12884 760 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 GRIN2CQ14957 1233 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 ZNF648Q5T619 568 aaPredicted RBP9.03□□□□□ -0.96
GARNL3-216ENST00000481242 ARHGAP11AQ6P4F7 1023 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 LARP4Q71RC2 724 aaKnown RBP eCLIP9.03□□□□□ -0.96
GARNL3-216ENST00000481242 PARS2Q7L3T8 475 aaKnown RBP9.03□□□□□ -0.96
GARNL3-216ENST00000481242 GALNTL5Q7Z4T8 443 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 ZNF227Q86WZ6 799 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 MARCH9Q86YJ5 346 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 CHERPQ8IWX8 916 aaKnown RBP9.03□□□□□ -0.96
GARNL3-216ENST00000481242 ZNF100Q8IYN0 542 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 NANOS1Q8WY41 292 aaKnown RBP9.03□□□□□ -0.96
GARNL3-216ENST00000481242 NSMAFQ92636 917 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 DIO2Q92813 273 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 CCDC106Q9BWC9 280 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 ITPAQ9BY32 194 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 OR51I1Q9H343 314 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 MYH13Q9UKX3 1938 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 ZBTB42B2RXF5 422 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 H0YAE9 185 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 ANKRD28O15084 1053 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 F3P13726 295 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 TIMP2P16035 220 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 GRK5P34947 590 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 WNT7BP56706 349 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 MXD1Q05195 221 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 NADK2Q4G0N4 442 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 RAET1LQ5VY80 246 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 CES4AQ5XG92 561 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 GLT8D1Q68CQ7 371 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 BORAQ6PGQ7 559 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 MFSD2AQ8NA29 543 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 OR8K5Q8NH50 307 aa9.03□□□□□ -0.96
GARNL3-216ENST00000481242 SETD6Q8TBK2 473 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms