RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 ZNF607Q96SK3 696 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 CSF3RQ99062 836 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 RBM4BQ9BQ04 359 aaKnown RBP10.36□□□□□ -0.75
VTI1A-204ENST00000480057 SPATA5L1Q9BVQ7 753 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 RBM4Q9BWF3 364 aaKnown RBP10.36□□□□□ -0.75
VTI1A-204ENST00000480057 BTBD2Q9BX70 525 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 ANKRD60Q9BZ19 345 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 OR51I1Q9H343 314 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 SERHL2Q9H4I8 314 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 TMEM74BQ9NUR3 256 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 SOHLH2Q9NX45 425 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 SMPD3Q9NY59 655 aaPredicted RBP10.36□□□□□ -0.75
VTI1A-204ENST00000480057 CALML5Q9NZT1 146 aa10.36□□□□□ -0.75
VTI1A-204ENST00000480057 MRPS33Q9Y291 106 aaKnown RBP10.36□□□□□ -0.75
VTI1A-204ENST00000480057 IGHV5-51A0A0C4DH38 117 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 A0A0G2JPF8 293 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 HYKKA2RU49 373 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 WASHC1A8K0Z3 465 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 TMEM229AB2RXF0 380 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 HNRNPCL2B2RXH8 293 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 HNRNPCL3B7ZW38 293 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 PDLIM1O00151 329 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 DLGAP1O14490 977 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 EI24O14681 340 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 ADAMDEC1O15204 470 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 B4GAT1O43505 415 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 CHST10O43529 356 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 HCRTR1O43613 425 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 FOXS1O43638 330 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 PLOD3O60568 738 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 SERPINB7O75635 380 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 ALPLP05186 524 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 BCHEP06276 602 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 SLC35E2P0CK97 266 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 HNRNPCL4P0DMR1 293 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 ETS2P15036 469 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 FPR1P21462 350 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 CD1CP29017 333 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 DNAJA1P31689 397 aaKnown RBP10.35□□□□□ -0.75
VTI1A-204ENST00000480057 DCTP40126 519 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 MC3RP41968 323 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 MAN2A2P49641 1150 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 CRISP3P54108 245 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 OR1D5P58170 312 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 SNRPNP63162 240 aaKnown RBP10.35□□□□□ -0.75
VTI1A-204ENST00000480057 SIM1P81133 766 aaPredicted RBP10.35□□□□□ -0.75
VTI1A-204ENST00000480057 SHC2P98077 582 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 KCNC4Q03721 635 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 DUSP2Q05923 314 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 SRSF5Q13243 272 aaKnown RBP10.35□□□□□ -0.75
VTI1A-204ENST00000480057 BLMHQ13867 455 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 FAM214AQ32MH5 1076 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 IQCCQ4KMZ1 466 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 ZNF628Q5EBL2 1059 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 TMEM107Q6UX40 140 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 CEP68Q76N32 757 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 PRSS41Q7RTY9 318 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 CARM1Q86X55 608 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 PIGKQ92643 395 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 TPD52L3Q96J77 140 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 EPYCQ99645 322 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 TMEM121BQ9BXQ6 578 aaPredicted RBP10.35□□□□□ -0.75
VTI1A-204ENST00000480057 ACTRT3Q9BYD9 372 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 CAPN10Q9HC96 672 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 PRUNE2Q8WUY3 3088 aa10.35□□□□□ -0.75
VTI1A-204ENST00000480057 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 SYNDIG1LA6NDD5 238 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 ZNF860A6NHJ4 632 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 SGK494L7N484 410 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 SLC28A2O43868 658 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 KIF1CO43896 1103 aaKnown RBP10.34□□□□□ -0.75
VTI1A-204ENST00000480057 RDH16O75452 317 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 E2F6O75461 281 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 MFN2O95140 757 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 CER1O95813 267 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 HMGN2P05204 90 aaKnown RBP10.34□□□□□ -0.75
VTI1A-204ENST00000480057 LYNP07948 512 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 ANKRD34CP0C6C1 535 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 C8orf89P0DMQ9 161 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 OR12D1P0DN82 309 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 NR2F1P10589 423 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 AQP1P29972 269 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 GALNSP34059 522 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 PPM1FP49593 454 aaPredicted RBP10.34□□□□□ -0.75
VTI1A-204ENST00000480057 ARL4DP49703 201 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 CHN2P52757 468 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 RPS26P62854 115 aaKnown RBP10.34□□□□□ -0.75
VTI1A-204ENST00000480057 OLR1P78380 273 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 IGLV3-21P80748 117 aaPredicted RBP10.34□□□□□ -0.75
VTI1A-204ENST00000480057 VLDLRP98155 873 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 PPP2R2BQ00005 443 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 MERTKQ12866 999 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 LASP1Q14847 261 aaKnown RBP10.34□□□□□ -0.75
VTI1A-204ENST00000480057 MAPK11Q15759 364 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 GPR19Q15760 415 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 DEFB110Q30KQ9 67 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 HLA-BQ31612 363 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 ZNF750Q32MQ0 723 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 SLC36A3Q495N2 470 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 EXOSC6Q5RKV6 272 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms