RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 HIVEP2P31629 2446 aa14.68□□□□□ -0.06
DDX56-210ENST00000479440 KIAA1549Q9HCM3 1950 aa14.67□□□□□ -0.06
DDX56-210ENST00000479440 C2orf92A0A1B0GVN3 265 aa14.67□□□□□ -0.06
DDX56-210ENST00000479440 CTIFO43310 598 aaKnown RBP14.67□□□□□ -0.06
DDX56-210ENST00000479440 CNOT4O95628 575 aaKnown RBP14.67□□□□□ -0.06
DDX56-210ENST00000479440 SERPINB1P30740 379 aa14.67□□□□□ -0.06
DDX56-210ENST00000479440 BUD31P41223 144 aaPredicted RBP14.67□□□□□ -0.06
DDX56-210ENST00000479440 DOC2AQ14183 400 aa14.67□□□□□ -0.06
DDX56-210ENST00000479440 TGFBIQ15582 683 aa14.67□□□□□ -0.06
DDX56-210ENST00000479440 PDK4Q16654 411 aa14.67□□□□□ -0.06
DDX56-210ENST00000479440 RNASEH2BQ5TBB1 312 aaKnown RBP14.67□□□□□ -0.06
DDX56-210ENST00000479440 FNDC7Q5VTL7 733 aa14.67□□□□□ -0.06
DDX56-210ENST00000479440 HLA-DQA1Q5Y7H0 255 aa14.67□□□□□ -0.06
DDX56-210ENST00000479440 CCDC137Q6PK04 289 aaKnown RBP14.67□□□□□ -0.06
DDX56-210ENST00000479440 ENPP6Q6UWR7 440 aa14.67□□□□□ -0.06
DDX56-210ENST00000479440 FAM83FQ8NEG4 500 aaPredicted RBP14.67□□□□□ -0.06
DDX56-210ENST00000479440 WNT2BQ93097 391 aa14.67□□□□□ -0.06
DDX56-210ENST00000479440 UBE2E3Q969T4 207 aa14.67□□□□□ -0.06
DDX56-210ENST00000479440 TP53INP1Q96A56 240 aa14.67□□□□□ -0.06
DDX56-210ENST00000479440 INTS12Q96CB8 462 aaKnown RBP14.67□□□□□ -0.06
DDX56-210ENST00000479440 PIK3IP1Q96FE7 263 aa14.67□□□□□ -0.06
DDX56-210ENST00000479440 TUBA1CQ9BQE3 449 aa14.67□□□□□ -0.06
DDX56-210ENST00000479440 NPFFR2Q9Y5X5 522 aa14.67□□□□□ -0.06
DDX56-210ENST00000479440 RNF212BA8MTL3 300 aa14.66□□□□□ -0.06
DDX56-210ENST00000479440 A8MXE2 369 aa14.66□□□□□ -0.06
DDX56-210ENST00000479440 BANF1O75531 89 aa14.66□□□□□ -0.06
DDX56-210ENST00000479440 CPN1P15169 458 aa14.66□□□□□ -0.06
DDX56-210ENST00000479440 KRT15P19012 456 aa14.66□□□□□ -0.06
DDX56-210ENST00000479440 CD22P20273 847 aa14.66□□□□□ -0.06
DDX56-210ENST00000479440 PTPN6P29350 595 aa14.66□□□□□ -0.06
DDX56-210ENST00000479440 SLCO1A2P46721 670 aa14.66□□□□□ -0.06
DDX56-210ENST00000479440 PTH2RP49190 550 aa14.66□□□□□ -0.06
DDX56-210ENST00000479440 NAGLUP54802 743 aa14.66□□□□□ -0.06
DDX56-210ENST00000479440 IRF8Q02556 426 aa14.66□□□□□ -0.06
DDX56-210ENST00000479440 PCDH1Q08174 1060 aa14.66□□□□□ -0.06
DDX56-210ENST00000479440 SLAMF1Q13291 335 aa14.66□□□□□ -0.06
DDX56-210ENST00000479440 ZNF460Q14592 562 aa14.66□□□□□ -0.06
DDX56-210ENST00000479440 GCNT2Q8N0V5 402 aa14.66□□□□□ -0.06
DDX56-210ENST00000479440 TRIM58Q8NG06 486 aa14.66□□□□□ -0.06
DDX56-210ENST00000479440 OR1J4Q8NGS1 313 aa14.66□□□□□ -0.06
DDX56-210ENST00000479440 ZNF473Q8WTR7 871 aaKnown RBP14.66□□□□□ -0.06
DDX56-210ENST00000479440 RIT1Q92963 219 aa14.66□□□□□ -0.06
DDX56-210ENST00000479440 CENPKQ9BS16 269 aa14.66□□□□□ -0.06
DDX56-210ENST00000479440 MED18Q9BUE0 208 aa14.66□□□□□ -0.06
DDX56-210ENST00000479440 RBSNQ9H1K0 784 aa14.66□□□□□ -0.06
DDX56-210ENST00000479440 FAM95CA0A1B0GW59 222 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 DEFB108AA8MXU0 73 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 GNB5O14775 395 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 STK16O75716 305 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 PCNAP12004 261 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 CRYGSP22914 178 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 CHMP24386 653 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 GALNSP34059 522 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 SOX18P35713 384 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 GGT5P36269 586 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 MC3RP41968 323 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 CASP3P42574 277 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 HSPA7P48741 367 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 PCYT1AP49585 367 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 RAP1GDS1P52306 607 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 DMTNQ08495 405 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 SETDB1Q15047 1291 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 TBCCQ15814 346 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 KBTBD12Q3ZCT8 623 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 KHDRBS2Q5VWX1 349 aaKnown RBP14.65□□□□□ -0.06
DDX56-210ENST00000479440 TIGD3Q6B0B8 471 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 OR4C11Q6IEV9 310 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 ADGRE4PQ86SQ3 457 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 YRDCQ86U90 279 aaKnown RBP14.65□□□□□ -0.06
DDX56-210ENST00000479440 GPR180Q86V85 440 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 PPP1R14CQ8TAE6 165 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 DOK4Q8TEW6 326 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 SLC44A1Q8WWI5 657 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 CFAP36Q96G28 342 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 UCN2Q96RP3 112 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 METTL7AQ9H8H3 244 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 POPDC3Q9HBV1 291 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 KLHL28Q9NXS3 571 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 CLCF1Q9UBD9 225 aa14.65□□□□□ -0.06
DDX56-210ENST00000479440 MPDZO75970 2070 aa14.64□□□□□ -0.07
DDX56-210ENST00000479440 MSTNO14793 375 aa14.64□□□□□ -0.07
DDX56-210ENST00000479440 SIAH2O43255 324 aa14.64□□□□□ -0.07
DDX56-210ENST00000479440 PRAMEF4O60810 478 aa14.64□□□□□ -0.07
DDX56-210ENST00000479440 TGFB1P01137 390 aa14.64□□□□□ -0.07
DDX56-210ENST00000479440 CLPSP04118 112 aa14.64□□□□□ -0.07
DDX56-210ENST00000479440 RHOXF2BP0C7M4 288 aa14.64□□□□□ -0.07
DDX56-210ENST00000479440 RPS13P62277 151 aaKnown RBP14.64□□□□□ -0.07
DDX56-210ENST00000479440 SRYQ05066 204 aa14.64□□□□□ -0.07
DDX56-210ENST00000479440 CHIT1Q13231 466 aa14.64□□□□□ -0.07
DDX56-210ENST00000479440 CYP1B1Q16678 543 aa14.64□□□□□ -0.07
DDX56-210ENST00000479440 CDKL4Q5MAI5 379 aa14.64□□□□□ -0.07
DDX56-210ENST00000479440 PRAMEF9Q5VWM5 478 aa14.64□□□□□ -0.07
DDX56-210ENST00000479440 SULT1C3Q6IMI6 304 aa14.64□□□□□ -0.07
DDX56-210ENST00000479440 MED27Q6P2C8 311 aa14.64□□□□□ -0.07
DDX56-210ENST00000479440 ANGPTL8Q6UXH0 198 aa14.64□□□□□ -0.07
DDX56-210ENST00000479440 TMEM64Q6YI46 380 aa14.64□□□□□ -0.07
DDX56-210ENST00000479440 LRRC70Q7Z2Q7 622 aa14.64□□□□□ -0.07
DDX56-210ENST00000479440 GRAMD2AQ8IUY3 354 aa14.64□□□□□ -0.07
DDX56-210ENST00000479440 OR14L1PQ8NHC6 308 aa14.64□□□□□ -0.07
DDX56-210ENST00000479440 ANKRD49Q8WVL7 239 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms