RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 DDX6P26196 483 aaKnown RBP eCLIP12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 SOX3P41225 446 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 GPR15P49685 360 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 AKR1D1P51857 326 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 ERVPABLB-1P60509 514 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 CYP4F8P98187 520 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 ACVR1Q04771 509 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 VMACQ2NL98 169 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 PLA1AQ53H76 456 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 RGS7BPQ6MZT1 257 aaPredicted RBP12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 ZNF852Q6ZMS4 543 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 USP45Q70EL2 814 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 TMEM150AQ86TG1 271 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 SPATA2LQ8IUW3 424 aaPredicted RBP12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 OR10G2Q8NGC3 310 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 OR4D10Q8NGI6 311 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 KCTD13Q8WZ19 329 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 CLDN23Q96B33 292 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 SEC22CQ9BRL7 303 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 B3GAT2Q9NPZ5 323 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 TAS2R13Q9NYV9 303 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 ACTR10Q9NZ32 417 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 HCN3Q9P1Z3 774 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 MARCH4Q9P2E8 410 aaPredicted RBP12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 MRPS17Q9Y2R5 130 aaKnown RBP12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 NME7Q9Y5B8 376 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 MAN2B1O00754 1011 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 LMO2P25791 158 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 RPL35P42766 123 aaKnown RBP12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 HTR6P50406 440 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 MXD1Q05195 221 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 CAMK2DQ13557 499 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 IL18Q14116 193 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 PTGR1Q14914 329 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 UBXN2BQ14CS0 331 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 NCF4Q15080 339 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 PABPC1L2AQ5JQF8 200 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 C6orf132Q5T0Z8 1188 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 HACD4Q5VWC8 232 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 ZNF57Q68EA5 555 aaPredicted RBP12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 MZT2AQ6P582 158 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 YAF2Q8IY57 180 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 PROKR2Q8NFJ6 384 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 SH3RF2Q8TEC5 729 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 TRMT2BQ96GJ1 504 aaKnown RBP12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 CELF6Q96J87 481 aaKnown RBP12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 SLC38A2Q96QD8 506 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 FEVQ99581 238 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 RBCK1Q9BYM8 510 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 CRTAC1Q9NQ79 661 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 COPZ2Q9P299 210 aa12.5□□□□□ -0.41
CNKSR3-204ENST00000479339 SLC38A8A6NNN8 435 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 J3KR12 359 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 DNASE2O00115 360 aaPredicted RBP12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 AIPO00170 330 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 TNFRSF11BO00300 401 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 GNB5O14775 395 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 SLC19A2O60779 497 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 RNGTTO60942 597 aaKnown RBP12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 CFDP00746 253 aaPredicted RBP12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 HLA-DQB2P05538 268 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 TGM4P49221 684 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 EVX1P49640 407 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 STK19P49842 368 aaPredicted RBP12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 AGTR2P50052 363 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 CDH18Q13634 790 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 GPR68Q15743 365 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 SPIN4Q56A73 249 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 C3orf38Q5JPI3 329 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 LDB1Q86U70 411 aaPredicted RBP12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 ZNF687Q8N1G0 1237 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 IL17RCQ8NAC3 791 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 OR6C4Q8NGE1 309 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 C7orf34Q96L11 122 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 TBATAQ96M53 351 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 LRRC3BQ96PB8 259 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 SLC46A2Q9BY10 475 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 SLC25A51Q9H1U9 297 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 OR51J1Q9H342 316 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 FZD3Q9NPG1 666 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 BRD7Q9NPI1 651 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 SERHLQ9NQF3 203 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 UXTQ9UBK9 157 aaPredicted RBP12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 OR12D3Q9UGF7 316 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 EIF2B4Q9UI10 523 aaKnown RBP12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 ZFR2Q9UPR6 939 aaKnown RBP12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 CCL27Q9Y4X3 112 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 NUBP2Q9Y5Y2 271 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 COL4A2P08572 1712 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 COL4A3Q01955 1670 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 H7C2Y5 167 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 GATCO43716 136 aaKnown RBP12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 PRAMEF12O95522 483 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 OTCP00480 354 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 H2AFB1P0C5Y9 115 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 H2AFB2P0C5Z0 115 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 PEPDP12955 493 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 MMP12P39900 470 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 RAB13P51153 203 aa12.49□□□□□ -0.41
CNKSR3-204ENST00000479339 SSTP61278 116 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms