RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 CSNK1G2P78368 415 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 IRF3Q14653 427 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 SF3B4Q15427 424 aaKnown RBP eCLIP10.23□□□□□ -0.771e-6■■■■■ 49.7
VPS52-217ENST00000478934 MLIPQ5VWP3 458 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 CCBE1Q6UXH8 406 aaPredicted RBP10.23□□□□□ -0.77
VPS52-217ENST00000478934 ZNF765Q7L2R6 523 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 GDPD3Q7L5L3 318 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 DOK4Q8TEW6 326 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 OR5P2Q8WZ92 322 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 FCGR1BQ92637 280 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 UBE2E3Q969T4 207 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 ZG16BQ96DA0 208 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 C16orf58Q96GQ5 468 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 RHBGQ9H310 441 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 SEMA3GQ9NS98 782 aa10.23□□□□□ -0.77
VPS52-217ENST00000478934 GPC6Q9Y625 555 aaPredicted RBP10.23□□□□□ -0.77
VPS52-217ENST00000478934 A0A1W2PP55 124 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 TLR4O00206 839 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 KMOO15229 486 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 OXSR1O95747 527 aaPredicted RBP10.22□□□□□ -0.77
VPS52-217ENST00000478934 IFNA14P01570 189 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 MAT2AP31153 395 aaKnown RBP10.22□□□□□ -0.77
VPS52-217ENST00000478934 RPL3P39023 403 aaKnown RBP10.22□□□□□ -0.77
VPS52-217ENST00000478934 CSNK2BP67870 215 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 TUBA1BP68363 451 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 TARDBPQ13148 414 aaKnown RBP eCLIP10.22□□□□□ -0.774e-7■■□□□ 12.9
VPS52-217ENST00000478934 NDUFAF5Q5TEU4 345 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 IKBIPQ70UQ0 350 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 TUBA1AQ71U36 451 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 DEPDC4Q8N2C3 294 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 TCEANCQ8N8B7 351 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 OR8K5Q8NH50 307 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 PPP1R16AQ96I34 528 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 SLC6A18Q96N87 628 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 FCRL4Q96PJ5 515 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 SDHCQ99643 169 aaPredicted RBP10.22□□□□□ -0.77
VPS52-217ENST00000478934 PLA2G2FQ9BZM2 168 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 NUAK2Q9H093 628 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 EHD3Q9NZN3 535 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 KCND3Q9UK17 655 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 PCDHGB6Q9Y5F9 930 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 GPC1P35052 558 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 UGT2B10P36537 528 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 RPS19P39019 145 aaKnown RBP10.22□□□□□ -0.77
VPS52-217ENST00000478934 HOXC5Q00444 222 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 HEPACAMQ14CZ8 416 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 C2orf27AQ580R0 203 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 PGBD2Q6P3X8 592 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 ATCAYQ86WG3 371 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 CCDC116Q8IYX3 515 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 OR8H2Q8N162 312 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 SP7Q8TDD2 431 aaPredicted RBP10.22□□□□□ -0.77
VPS52-217ENST00000478934 SLC35B4Q969S0 331 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 NEDD4LQ96PU5 975 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 TRMT61BQ9BVS5 477 aaKnown RBP10.22□□□□□ -0.77
VPS52-217ENST00000478934 BARHL1Q9BZE3 327 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 UCK2Q9BZX2 261 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 SNTG1Q9NSN8 517 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 AHSPQ9NZD4 102 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 SEC14L3Q9UDX4 400 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 FBXW2Q9UKT8 454 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 CEP290O15078 2479 aa10.22□□□□□ -0.77
VPS52-217ENST00000478934 MRPS14O60783 128 aaKnown RBP10.21□□□□□ -0.77
VPS52-217ENST00000478934 NFATC1O95644 943 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 SLC35G4P0C7Q5 338 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 BCL6P41182 706 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 SSR2P43308 183 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 KCNJ5P48544 419 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 NCBP2P52298 156 aaKnown RBP eCLIP10.21□□□□□ -0.772e-6■■□□□ 13
VPS52-217ENST00000478934 LIMK1P53667 647 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 SEC13P55735 322 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 RAB8AP61006 207 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 REEP5Q00765 189 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 DCST1Q5T197 706 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 AGBL4Q5VU57 503 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 C18orf63Q68DL7 685 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 PODNL1Q6PEZ8 512 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 ADAMTSL4Q6UY14 1074 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 AKAP14Q86UN6 197 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 UBE2J2Q8N2K1 259 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 FBXL6Q8N531 539 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 KBTBD8Q8NFY9 601 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 OR2A1Q8NGT9 310 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 OPALINQ96PE5 141 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 A4GALTQ9NPC4 353 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 EQTNQ9NQ60 294 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 ZCCHC3Q9NUD5 404 aaKnown RBP10.21□□□□□ -0.77
VPS52-217ENST00000478934 SPHK1Q9NYA1 384 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 TVP23BQ9NYZ1 205 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 TMCC3Q9ULS5 477 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 ZFR2Q9UPR6 939 aaKnown RBP10.21□□□□□ -0.77
VPS52-217ENST00000478934 CARD8Q9Y2G2 431 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 ATG4BQ9Y4P1 393 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 KIF26AQ9ULI4 1882 aaPredicted RBP10.21□□□□□ -0.77
VPS52-217ENST00000478934 DSPPQ9NZW4 1301 aa10.21□□□□□ -0.77
VPS52-217ENST00000478934 LOC110117498-PIK3R3F6TDL0 507 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 PRKYO43930 277 aa10.21□□□□□ -0.78
VPS52-217ENST00000478934 TP53P04637 393 aaPredicted RBP10.21□□□□□ -0.78
VPS52-217ENST00000478934 H1F0P07305 194 aaKnown RBP10.21□□□□□ -0.78
VPS52-217ENST00000478934 NR2F1P10589 423 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms