RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 ZNF385AQ96PM9 386 aaKnown RBP3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 SNX18Q96RF0 628 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 CRAMP1Q96RY5 1269 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 TEAD3Q99594 435 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 NPAS1Q99742 590 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 P2RY13Q9BPV8 354 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 RTP3Q9BQQ7 232 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 TUBGCP2Q9BSJ2 902 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 NAT9Q9BTE0 207 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 PTDSS2Q9BVG9 487 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 TMED9Q9BVK6 235 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 POLDIP3Q9BY77 421 aaKnown RBP3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 ACTRT3Q9BYD9 372 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 CLPBQ9H078 707 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 MIS12Q9H081 205 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 PCDHAC1Q9H158 963 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 SLC38A1Q9H2H9 487 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 SMYD3Q9H7B4 428 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 COG4Q9H9E3 785 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 PLEKHA2Q9HB19 425 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 LPAR2Q9HBW0 351 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 MOV10Q9HCE1 1003 aaKnown RBP3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 KCNMB3Q9NPA1 279 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 FAM207AQ9NSI2 230 aaPredicted RBP3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 PARVAQ9NVD7 372 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 THUMPD1Q9NXG2 353 aaKnown RBP3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 DPP3Q9NY33 737 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 ADA2Q9NZK5 511 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 GCNT4Q9P109 453 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 ZNF212Q9UDV6 495 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 UBQLN2Q9UHD9 624 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 IL17BQ9UHF5 180 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 MKLN1Q9UL63 735 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 MGAT4BQ9UQ53 548 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 MRPS33Q9Y291 106 aaKnown RBP3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 CA5BQ9Y2D0 317 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 POFUT2Q9Y2G5 429 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 RBMX2Q9Y388 322 aaKnown RBP3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 MMP24Q9Y5R2 645 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 CPQQ9Y646 472 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 MRPS18BQ9Y676 258 aaKnown RBP3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 FKBP7Q9Y680 259 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 SLC22A7Q9Y694 548 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 SPATA31A6Q5VVP1 1343 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 PNPLA6Q8IY17 1366 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 RTL9Q8NET4 1388 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 HFM1A2PYH4 1435 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 COL22A1Q8NFW1 1626 aaPredicted RBP3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 COL4A3Q01955 1670 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 FMN2Q9NZ56 1722 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 MARF1Q9Y4F3 1742 aaKnown RBP3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 KIF1AQ12756 1690 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 PLCH1Q4KWH8 1693 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 C1orf167Q5SNV9 1468 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 SETD5Q9C0A6 1442 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 NID2Q14112 1375 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 SF3B1O75533 1304 aaKnown RBP eCLIP3.31□□□□□ -1.883e-6■■■■■ 63.6
FNDC3B-209ENST00000478016 AFF2P51816 1311 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 EDDM13A0A1B0GTR0 161 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 PQLC2LA1A4F0 135 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 ARHGEF35A5YM69 484 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 ANKRD61A6NGH8 418 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 TUBAL3A6NHL2 446 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 ERI2A8K979 691 aaKnown RBP3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 TEX22C9J3V5 150 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 E9PAM4 449 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 SGK494L7N484 410 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 M0QZK8 103 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 PEX12O00623 359 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 ARPC3O15145 178 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 ACOX3O15254 700 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 MID1O15344 667 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 SLC31A2O15432 143 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 MPPED1O15442 326 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 EMC8O43402 210 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 EIF1BO60739 113 aaKnown RBP3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 DPM1O60762 260 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 AVILO75366 819 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 NDUFS3O75489 264 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 VNN1O95497 513 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 FCER2P06734 321 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 GP1BAP07359 652 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 G6PDP11413 515 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 COX7A2P14406 83 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 CD19P15391 556 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 H2AFXP16104 143 aaPredicted RBP3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 ZNF26P17031 533 aaPredicted RBP3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 HNF1AP20823 631 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 ACVR2AP27037 513 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 BDKRB2P30411 391 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 CASP14P31944 242 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 TGFBR2P37173 567 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 TALDO1P37837 337 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 EIF1P41567 113 aaKnown RBP3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 GSSP48637 474 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 GNG2P59768 71 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 LILRA4P59901 499 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 VSNL1P62760 191 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 TNNC1P63316 161 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms