RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 ST13P4Q8IZP2 240 aaPredicted RBP18.44■□□□□ 0.54
PDLIM1-202ENST00000477757 GCNT2Q8N0V5 402 aa18.44■□□□□ 0.54
PDLIM1-202ENST00000477757 WNT2BQ93097 391 aa18.44■□□□□ 0.54
PDLIM1-202ENST00000477757 PTCD3Q96EY7 689 aaKnown RBP18.44■□□□□ 0.54
PDLIM1-202ENST00000477757 TMEM41AQ96HV5 264 aa18.44■□□□□ 0.54
PDLIM1-202ENST00000477757 PELOQ9BRX2 385 aaKnown RBP18.44■□□□□ 0.54
PDLIM1-202ENST00000477757 EFCAB11Q9BUY7 163 aa18.44■□□□□ 0.54
PDLIM1-202ENST00000477757 RPF2Q9H7B2 306 aaKnown RBP18.44■□□□□ 0.54
PDLIM1-202ENST00000477757 SNX15Q9NRS6 342 aa18.44■□□□□ 0.54
PDLIM1-202ENST00000477757 ZNF226Q9NYT6 803 aa18.44■□□□□ 0.54
PDLIM1-202ENST00000477757 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.43■□□□□ 0.54
PDLIM1-202ENST00000477757 H0Y3Z8 333 aa18.43■□□□□ 0.54
PDLIM1-202ENST00000477757 TNFSF13O75888 250 aa18.43■□□□□ 0.54
PDLIM1-202ENST00000477757 PTPN6P29350 595 aa18.43■□□□□ 0.54
PDLIM1-202ENST00000477757 SSR2P43308 183 aa18.43■□□□□ 0.54
PDLIM1-202ENST00000477757 TMED10P49755 219 aaKnown RBP18.43■□□□□ 0.54
PDLIM1-202ENST00000477757 EEF1A1P68104 462 aaKnown RBP18.43■□□□□ 0.54
PDLIM1-202ENST00000477757 DOC2AQ14183 400 aa18.43■□□□□ 0.54
PDLIM1-202ENST00000477757 TMEM35AQ53FP2 167 aa18.43■□□□□ 0.54
PDLIM1-202ENST00000477757 EEF1A1P5Q5VTE0 462 aa18.43■□□□□ 0.54
PDLIM1-202ENST00000477757 TIGD3Q6B0B8 471 aa18.43■□□□□ 0.54
PDLIM1-202ENST00000477757 FAM83FQ8NEG4 500 aaPredicted RBP18.43■□□□□ 0.54
PDLIM1-202ENST00000477757 DOK4Q8TEW6 326 aa18.43■□□□□ 0.54
PDLIM1-202ENST00000477757 VPS39Q96JC1 886 aa18.43■□□□□ 0.54
PDLIM1-202ENST00000477757 WFIKKN1Q96NZ8 548 aa18.43■□□□□ 0.54
PDLIM1-202ENST00000477757 TMEM79Q9BSE2 394 aa18.43■□□□□ 0.54
PDLIM1-202ENST00000477757 DNAJC11Q9NVH1 559 aa18.43■□□□□ 0.54
PDLIM1-202ENST00000477757 CLCF1Q9UBD9 225 aa18.43■□□□□ 0.54
PDLIM1-202ENST00000477757 DSCAMO60469 2012 aa18.42■□□□□ 0.54
PDLIM1-202ENST00000477757 CLGNO14967 610 aa18.42■□□□□ 0.54
PDLIM1-202ENST00000477757 BANF1O75531 89 aa18.42■□□□□ 0.54
PDLIM1-202ENST00000477757 PAX1P15863 534 aa18.42■□□□□ 0.54
PDLIM1-202ENST00000477757 GCKP35557 465 aa18.42■□□□□ 0.54
PDLIM1-202ENST00000477757 CASP3P42574 277 aa18.42■□□□□ 0.54
PDLIM1-202ENST00000477757 TNFRSF17Q02223 184 aa18.42■□□□□ 0.54
PDLIM1-202ENST00000477757 GAB1Q13480 694 aa18.42■□□□□ 0.54
PDLIM1-202ENST00000477757 ZNF267Q14586 743 aaPredicted RBP18.42■□□□□ 0.54
PDLIM1-202ENST00000477757 AP5B1Q2VPB7 878 aa18.42■□□□□ 0.54
PDLIM1-202ENST00000477757 PAGE2BQ5JRK9 111 aa18.42■□□□□ 0.54
PDLIM1-202ENST00000477757 YRDCQ86U90 279 aaKnown RBP18.42■□□□□ 0.54
PDLIM1-202ENST00000477757 PPIL6Q8IXY8 311 aa18.42■□□□□ 0.54
PDLIM1-202ENST00000477757 IGFBPL1Q8WX77 278 aa18.42■□□□□ 0.54
PDLIM1-202ENST00000477757 TANKQ92844 425 aa18.42■□□□□ 0.54
PDLIM1-202ENST00000477757 TP53INP1Q96A56 240 aa18.42■□□□□ 0.54
PDLIM1-202ENST00000477757 MARK4Q96L34 752 aa18.42■□□□□ 0.54
PDLIM1-202ENST00000477757 KRT12Q99456 494 aa18.42■□□□□ 0.54
PDLIM1-202ENST00000477757 NAT9Q9BTE0 207 aa18.42■□□□□ 0.54
PDLIM1-202ENST00000477757 PHACTR1Q9C0D0 580 aa18.42■□□□□ 0.54
PDLIM1-202ENST00000477757 PLAC1Q9HBJ0 212 aa18.42■□□□□ 0.54
PDLIM1-202ENST00000477757 MS4A12Q9NXJ0 267 aa18.42■□□□□ 0.54
PDLIM1-202ENST00000477757 KLHL28Q9NXS3 571 aa18.42■□□□□ 0.54
PDLIM1-202ENST00000477757 CTNNAL1Q9UBT7 734 aa18.42■□□□□ 0.54
PDLIM1-202ENST00000477757 MED12Q93074 2177 aa18.42■□□□□ 0.54
PDLIM1-202ENST00000477757 EXPH5Q8NEV8 1989 aa18.42■□□□□ 0.54
PDLIM1-202ENST00000477757 NCF1BA6NI72 391 aaPredicted RBP18.41■□□□□ 0.54
PDLIM1-202ENST00000477757 NCF1CA8MVU1 366 aaPredicted RBP18.41■□□□□ 0.54
PDLIM1-202ENST00000477757 MSTNO14793 375 aa18.41■□□□□ 0.54
PDLIM1-202ENST00000477757 NCF1P14598 390 aaPredicted RBP18.41■□□□□ 0.54
PDLIM1-202ENST00000477757 CCKARP32238 428 aa18.41■□□□□ 0.54
PDLIM1-202ENST00000477757 GGT5P36269 586 aa18.41■□□□□ 0.54
PDLIM1-202ENST00000477757 RPP38P78345 283 aaKnown RBP18.41■□□□□ 0.54
PDLIM1-202ENST00000477757 DMTNQ08495 405 aa18.41■□□□□ 0.54
PDLIM1-202ENST00000477757 LAPTM5Q13571 262 aa18.41■□□□□ 0.54
PDLIM1-202ENST00000477757 ZNF460Q14592 562 aa18.41■□□□□ 0.54
PDLIM1-202ENST00000477757 RNASEH2BQ5TBB1 312 aaKnown RBP18.41■□□□□ 0.54
PDLIM1-202ENST00000477757 HMBOX1Q6NT76 420 aa18.41■□□□□ 0.54
PDLIM1-202ENST00000477757 SCIMPQ6UWF3 145 aa18.41■□□□□ 0.54
PDLIM1-202ENST00000477757 TCAIMQ8N3R3 496 aa18.41■□□□□ 0.54
PDLIM1-202ENST00000477757 ZNF473Q8WTR7 871 aaKnown RBP18.41■□□□□ 0.54
PDLIM1-202ENST00000477757 HS3ST6Q96QI5 342 aa18.41■□□□□ 0.54
PDLIM1-202ENST00000477757 MED18Q9BUE0 208 aa18.41■□□□□ 0.54
PDLIM1-202ENST00000477757 G6PC3Q9BUM1 346 aa18.41■□□□□ 0.54
PDLIM1-202ENST00000477757 CNOT10Q9H9A5 744 aaKnown RBP18.41■□□□□ 0.54
PDLIM1-202ENST00000477757 PPANQ9NQ55 473 aaKnown RBP18.41■□□□□ 0.54
PDLIM1-202ENST00000477757 WWOXQ9NZC7 414 aa18.41■□□□□ 0.54
PDLIM1-202ENST00000477757 C2orf92A0A1B0GVN3 265 aa18.4■□□□□ 0.54
PDLIM1-202ENST00000477757 A0A1W2PNV4 684 aa18.4■□□□□ 0.54
PDLIM1-202ENST00000477757 GNB5O14775 395 aa18.4■□□□□ 0.54
PDLIM1-202ENST00000477757 SNPHO15079 494 aa18.4■□□□□ 0.54
PDLIM1-202ENST00000477757 TAPBPO15533 448 aa18.4■□□□□ 0.54
PDLIM1-202ENST00000477757 OR10H2O60403 315 aa18.4■□□□□ 0.54
PDLIM1-202ENST00000477757 CDH16O75309 829 aa18.4■□□□□ 0.54
PDLIM1-202ENST00000477757 CXCR5P32302 372 aa18.4■□□□□ 0.54
PDLIM1-202ENST00000477757 FAM27E3Q08E93 113 aa18.4■□□□□ 0.54
PDLIM1-202ENST00000477757 CAPRIN1Q14444 709 aaKnown RBP18.4■□□□□ 0.54
PDLIM1-202ENST00000477757 TGFBIQ15582 683 aa18.4■□□□□ 0.54
PDLIM1-202ENST00000477757 PDK4Q16654 411 aa18.4■□□□□ 0.54
PDLIM1-202ENST00000477757 HEPHL1Q6MZM0 1159 aa18.4■□□□□ 0.54
PDLIM1-202ENST00000477757 ENPP6Q6UWR7 440 aa18.4■□□□□ 0.54
PDLIM1-202ENST00000477757 PLXDC2Q6UX71 529 aa18.4■□□□□ 0.54
PDLIM1-202ENST00000477757 MEIOBQ8N635 442 aa18.4■□□□□ 0.54
PDLIM1-202ENST00000477757 SNX31Q8N9S9 440 aa18.4■□□□□ 0.54
PDLIM1-202ENST00000477757 ANKRD49Q8WVL7 239 aa18.4■□□□□ 0.54
PDLIM1-202ENST00000477757 RIT1Q92963 219 aa18.4■□□□□ 0.54
PDLIM1-202ENST00000477757 UCN3Q969E3 161 aa18.4■□□□□ 0.54
PDLIM1-202ENST00000477757 MAGOHBQ96A72 148 aaKnown RBP18.4■□□□□ 0.54
PDLIM1-202ENST00000477757 PIGQQ9BRB3 760 aa18.4■□□□□ 0.54
PDLIM1-202ENST00000477757 PHF11Q9UIL8 331 aa18.4■□□□□ 0.54
PDLIM1-202ENST00000477757 MED12LQ86YW9 2145 aa18.4■□□□□ 0.54
PDLIM1-202ENST00000477757 PRKRAO75569 313 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms