RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 C14orf28Q4W4Y0 310 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 KDM4DQ6B0I6 523 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 FAHD1Q6P587 224 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 VTCN1Q7Z7D3 282 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 FAM20CQ8IXL6 584 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 AMER3Q8N944 861 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 KCT2Q8NC54 265 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 TOR1AIP2Q8NFQ8 470 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 OR6C4Q8NGE1 309 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 OR5AK3PQ8NH89 298 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 C1orf216Q8TAB5 229 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 ZNF675Q8TD23 568 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 HDAC2Q92769 488 aaKnown RBP7.48□□□□□ -1.21
VMA21-203ENST00000477649 MAL2Q969L2 176 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 ELP4Q96EB1 424 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 CNRIP1Q96F85 164 aaPredicted RBP7.48□□□□□ -1.21
VMA21-203ENST00000477649 TMEM19Q96HH6 336 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 ZNF354BQ96LW1 612 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 C10orf90Q96M02 699 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 HSPA12BQ96MM6 686 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 ZNF578Q96N58 590 aaPredicted RBP7.48□□□□□ -1.21
VMA21-203ENST00000477649 ZNF285Q96NJ3 590 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 GUCD1Q96NT3 240 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 MS4A4EQ96PG1 132 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 TRNT1Q96Q11 434 aaKnown RBP7.48□□□□□ -1.21
VMA21-203ENST00000477649 MAPKAP1Q9BPZ7 522 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 PELOQ9BRX2 385 aaKnown RBP7.48□□□□□ -1.21
VMA21-203ENST00000477649 ACTRT3Q9BYD9 372 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 ING2Q9H160 280 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 TCEAL2Q9H3H9 227 aaPredicted RBP7.48□□□□□ -1.21
VMA21-203ENST00000477649 ZNF556Q9HAH1 456 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 ANKHQ9HCJ1 492 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 NDUFAF4Q9P032 175 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 KIF17Q9P2E2 1029 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 ACSL6Q9UKU0 697 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 RAB23Q9ULC3 237 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 PLCL2Q9UPR0 1127 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 SLC9A8Q9Y2E8 581 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 LRP4O75096 1905 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 A0A0G2JN53 185 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 A0A1B0GTW7 788 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 LOC100130705A0A1B0GUX0 176 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 HYKKA2RU49 373 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 RHPN2P1A8MT19 583 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 hCG_2039718K7EN88 272 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 K7ESF4 209 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 TNFRSF11BO00300 401 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 PGRMC2O15173 223 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 PPM1DO15297 605 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 NUDT21O43809 227 aaKnown RBP7.47□□□□□ -1.21
VMA21-203ENST00000477649 SLC28A2O43868 658 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 PLOD3O60568 738 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 GPR75O95800 540 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 WNT1P04628 370 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 BCHEP06276 602 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 CCDC159P0C7I6 412 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 MSL3P1P0C860 447 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 SMIM18P0DKX4 95 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 CPMP14384 443 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 AQP1P29972 269 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 RRM2P31350 389 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 KCNJ5P48544 419 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 ARRB1P49407 418 aaPredicted RBP7.47□□□□□ -1.21
VMA21-203ENST00000477649 HLCSP50747 726 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 XKP51811 444 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 CRYBA2P53672 197 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 NUP107P57740 925 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 GPLD1P80108 840 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 HPCAP84074 193 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 KCNAB2Q13303 367 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 C1orf61Q13536 156 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 NR1D2Q14995 579 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 ZSWIM7Q19AV6 140 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 PRTGQ2VWP7 1150 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 FAM214AQ32MH5 1076 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 INAVAQ3KP66 663 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 DEFB134Q4QY38 66 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 ZNF542PQ5EBM4 170 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 COLEC12Q5KU26 742 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 C18orf63Q68DL7 685 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 CDC73Q6P1J9 531 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 TNFAIP8L2Q6P589 184 aaPredicted RBP7.47□□□□□ -1.21
VMA21-203ENST00000477649 TBPL2Q6SJ96 375 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 MED25Q71SY5 747 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 TRIM73Q86UV7 250 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 TSPYL5Q86VY4 417 aaPredicted RBP7.47□□□□□ -1.21
VMA21-203ENST00000477649 KMT5CQ86Y97 462 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 MCATQ8IVS2 390 aaKnown RBP7.47□□□□□ -1.21
VMA21-203ENST00000477649 ZNF595Q8IYB9 648 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 CCDC116Q8IYX3 515 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 MMP21Q8N119 569 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 OR2L13Q8N349 312 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 ZNF786Q8N393 782 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 PARP8Q8N3A8 854 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 DNAJC22Q8N4W6 341 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 ATG16L2Q8NAA4 619 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 NUP43Q8NFH3 380 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 GIPC3Q8TF64 312 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 OIT3Q8WWZ8 545 aa7.47□□□□□ -1.21
VMA21-203ENST00000477649 JPH3Q8WXH2 748 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms