RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 MIEF1Q9NQG6 463 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 MAT2BQ9NZL9 334 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 PHF11Q9UIL8 331 aa11.37□□□□□ -0.59
PRPF39-203ENST00000477626 TMEM221A6NGB7 291 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 H0YAE9 185 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 M0R296 226 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 SLC16A6O15403 523 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 ZNF682O95780 498 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 CBX7O95931 251 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 CPMP14384 443 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 SOX11P35716 441 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 KCNJ5P48544 419 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 CCT3P49368 545 aaKnown RBP11.36□□□□□ -0.59
PRPF39-203ENST00000477626 OR1D5P58170 312 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 PLCL1Q15111 1095 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 DEFB134Q4QY38 66 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 RPS26P11Q5JNZ5 115 aaPredicted RBP11.36□□□□□ -0.59
PRPF39-203ENST00000477626 SIGLEC11Q96RL6 698 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 SEPHS2Q99611 448 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 GABARAPL3Q9BY60 117 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 ANKRA2Q9H9E1 313 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 STARD5Q9NSY2 213 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 C19orf53Q9UNZ5 99 aaPredicted RBP11.36□□□□□ -0.59
PRPF39-203ENST00000477626 LYVE1Q9Y5Y7 322 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 EVPLLA8MZ36 301 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 TOX3O15405 576 aaPredicted RBP11.36□□□□□ -0.59
PRPF39-203ENST00000477626 SDC3O75056 442 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 SLITRK5O94991 958 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 KRT75O95678 551 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 ITGAMP11215 1152 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 TYRP1P17643 537 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 BIRC2Q13490 618 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 PDK3Q15120 406 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 GARNL3Q5VVW2 1013 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 LYSMD4Q5XG99 296 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 COX15Q7KZN9 410 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 TRIML2Q8N7C3 387 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 ZNF501Q96CX3 271 aaPredicted RBP11.36□□□□□ -0.59
PRPF39-203ENST00000477626 TMEM19Q96HH6 336 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 ARHGDIGQ99819 225 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 TREX2Q9BQ50 279 aaPredicted RBP11.36□□□□□ -0.59
PRPF39-203ENST00000477626 C9orf16Q9BUW7 83 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 FAIM2Q9BWQ8 316 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 ACER3Q9NUN7 267 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 MS4A12Q9NXJ0 267 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 PTGFRNQ9P2B2 879 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 KCNE5Q9UJ90 142 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 AURKCQ9UQB9 309 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 A0A1W2PQM1 296 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 ACP2P11117 423 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 PTGER1P34995 402 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 NCBP2P52298 156 aaKnown RBP eCLIP11.36□□□□□ -0.595e-8■■■□□ 16
PRPF39-203ENST00000477626 CASP9P55211 416 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 NRF1Q16656 503 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 PERM1Q5SV97 790 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 MFSD12Q6NUT3 480 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 CEACAM20Q6UY09 585 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 C11orf74Q86VG3 221 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 OR5D16Q8NGK9 328 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 SLC35A4Q96G79 324 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 C16orf58Q96GQ5 468 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 PITX2Q99697 317 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 LMF2Q9BU23 707 aaKnown RBP11.36□□□□□ -0.59
PRPF39-203ENST00000477626 GRIP2Q9C0E4 1043 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 RBM38Q9H0Z9 239 aaKnown RBP11.36□□□□□ -0.59
PRPF39-203ENST00000477626 OR51I1Q9H343 314 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 MAP4K5Q9Y4K4 846 aa11.36□□□□□ -0.59
PRPF39-203ENST00000477626 FAM227AF5H4B4 570 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 NTN3O00634 580 aaPredicted RBP11.35□□□□□ -0.59
PRPF39-203ENST00000477626 PGM3O95394 542 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 SNAP29O95721 258 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 LDLRP01130 860 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 THY1P04216 161 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 MC3RP41968 323 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 MANFP55145 182 aaKnown RBP11.35□□□□□ -0.59
PRPF39-203ENST00000477626 MAP4K2Q12851 820 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 HSPB3Q12988 150 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 ADCK2Q7Z695 626 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 ZC3H7AQ8IWR0 971 aaKnown RBP11.35□□□□□ -0.59
PRPF39-203ENST00000477626 TBC1D19Q8N5T2 526 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 RAD21L1Q9H4I0 556 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 C11orf16Q9NQ32 467 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 FSCN3Q9NQT6 498 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 RPS6KA6Q9UK32 745 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 PADI4Q9UM07 663 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 FHP07954 510 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 GPLD1P80108 840 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 MERTKQ12866 999 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 DAG1Q14118 895 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 SYPL1Q16563 259 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 REEP3Q6NUK4 255 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 TMEM107Q6UX40 140 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 FRRS1Q6ZNA5 592 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 ZDHHC21Q8IVQ6 265 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 TRIM48Q8IWZ4 208 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 OR5K1Q8NHB7 308 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 OR7D2Q96RA2 312 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 DNAAF2Q9NVR5 837 aaKnown RBP11.35□□□□□ -0.59
PRPF39-203ENST00000477626 LRIT1Q9P2V4 623 aa11.35□□□□□ -0.59
PRPF39-203ENST00000477626 FBXW2Q9UKT8 454 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms