RNA–Protein interactions for RNA: ENST00000477556.1

PABPC4-212, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 3

Gene PABPC4, Length 413 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-212ENST00000477556 ALDH18A1P54886 795 aaKnown RBP12.05□□□□□ -0.48
PABPC4-212ENST00000477556 RPP38P78345 283 aaKnown RBP12.05□□□□□ -0.48
PABPC4-212ENST00000477556 DUSP8Q13202 625 aa12.05□□□□□ -0.48
PABPC4-212ENST00000477556 GTF2H2Q13888 395 aa12.05□□□□□ -0.48
PABPC4-212ENST00000477556 RPS6KA2Q15349 733 aa12.05□□□□□ -0.48
PABPC4-212ENST00000477556 SF3B4Q15427 424 aaKnown RBP eCLIP12.05□□□□□ -0.484e-7■■■■■ 31.3
PABPC4-212ENST00000477556 CPSF6Q16630 551 aaKnown RBP eCLIP12.05□□□□□ -0.48
PABPC4-212ENST00000477556 C6orf163Q5TEZ5 329 aa12.05□□□□□ -0.48
PABPC4-212ENST00000477556 OR52E8Q6IFG1 317 aa12.05□□□□□ -0.48
PABPC4-212ENST00000477556 GTF2H2CQ6P1K8 395 aa12.05□□□□□ -0.48
PABPC4-212ENST00000477556 KLC3Q6P597 504 aa12.05□□□□□ -0.48
PABPC4-212ENST00000477556 NUDT13Q86X67 352 aa12.05□□□□□ -0.48
PABPC4-212ENST00000477556 CENPLQ8N0S6 344 aaPredicted RBP12.05□□□□□ -0.48
PABPC4-212ENST00000477556 TP53INP1Q96A56 240 aa12.05□□□□□ -0.48
PABPC4-212ENST00000477556 FOXC2Q99958 501 aa12.05□□□□□ -0.48
PABPC4-212ENST00000477556 GPATCH1Q9BRR8 931 aaKnown RBP12.05□□□□□ -0.48
PABPC4-212ENST00000477556 ZNF717Q9BY31 904 aaPredicted RBP12.05□□□□□ -0.48
PABPC4-212ENST00000477556 RAB17Q9H0T7 212 aa12.05□□□□□ -0.48
PABPC4-212ENST00000477556 DDX31Q9H8H2 851 aaKnown RBP12.05□□□□□ -0.48
PABPC4-212ENST00000477556 PSD3Q9NYI0 1048 aa12.05□□□□□ -0.48
PABPC4-212ENST00000477556 TNPO3Q9Y5L0 923 aaKnown RBP12.05□□□□□ -0.48
PABPC4-212ENST00000477556 CELSR1Q9NYQ6 3014 aa12.05□□□□□ -0.48
PABPC4-212ENST00000477556 NINQ8N4C6 2090 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 AKAP6Q13023 2319 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 FAM221AA4D161 298 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 WASHC1A8K0Z3 465 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 TRIM3O75382 744 aaPredicted RBP12.04□□□□□ -0.48
PABPC4-212ENST00000477556 TRAPPC6AO75865 159 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 SNX4O95219 450 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 AIFM1O95831 613 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 EPPINO95925 133 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 C2P06681 752 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 CD99P14209 185 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 BMP5P22003 454 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 PIK3R1P27986 724 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 BSGP35613 385 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 ARL1P40616 181 aaPredicted RBP12.04□□□□□ -0.48
PABPC4-212ENST00000477556 NRG3P56975 720 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 C2orf54Q08AI8 447 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 SNTB1Q13884 538 aaKnown RBP12.04□□□□□ -0.48
PABPC4-212ENST00000477556 ACAP2Q15057 778 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 PCBP2Q15366 365 aaKnown RBP eCLIP12.04□□□□□ -0.48
PABPC4-212ENST00000477556 ACSF3Q4G176 576 aaPredicted RBP12.04□□□□□ -0.48
PABPC4-212ENST00000477556 FLYWCH1Q4VC44 716 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 MROH9Q5TGP6 573 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 PACS2Q86VP3 889 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 LACC1Q8IV20 430 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 PM20D2Q8IYS1 436 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 RELL2Q8NC24 303 aaPredicted RBP12.04□□□□□ -0.48
PABPC4-212ENST00000477556 GOT1L1Q8NHS2 421 aaPredicted RBP12.04□□□□□ -0.48
PABPC4-212ENST00000477556 FBXO25Q8TCJ0 367 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 FAM222BQ8WU58 562 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 RNASE6Q93091 150 aaKnown RBP12.04□□□□□ -0.48
PABPC4-212ENST00000477556 HSPBAP1Q96EW2 488 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 SECISBP2Q96T21 854 aaKnown RBP12.04□□□□□ -0.48
PABPC4-212ENST00000477556 SERPINI1Q99574 410 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 CXXC4Q9H2H0 198 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 CLEC4MQ9H2X3 399 aaPredicted RBP12.04□□□□□ -0.48
PABPC4-212ENST00000477556 IPPKQ9H8X2 491 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 RASSF1Q9NS23 344 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 CCM2LQ9NUG4 571 aaPredicted RBP12.04□□□□□ -0.48
PABPC4-212ENST00000477556 CPSF2Q9P2I0 782 aaKnown RBP12.04□□□□□ -0.48
PABPC4-212ENST00000477556 MTRF1LQ9UGC7 380 aaKnown RBP12.04□□□□□ -0.48
PABPC4-212ENST00000477556 ST6GALNAC2Q9UJ37 374 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 FOXD3Q9UJU5 478 aaPredicted RBP12.04□□□□□ -0.48
PABPC4-212ENST00000477556 NPFFR2Q9Y5X5 522 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 IKBKGQ9Y6K9 419 aa12.04□□□□□ -0.48
PABPC4-212ENST00000477556 ANKHD1Q8IWZ3 2542 aaKnown RBP12.03□□□□□ -0.48
PABPC4-212ENST00000477556 ABCA4P78363 2273 aa12.03□□□□□ -0.48
PABPC4-212ENST00000477556 LRRC14BA6NHZ5 514 aa12.03□□□□□ -0.48
PABPC4-212ENST00000477556 FOXE1O00358 373 aaPredicted RBP12.03□□□□□ -0.48
PABPC4-212ENST00000477556 DIAPH2O60879 1101 aa12.03□□□□□ -0.48
PABPC4-212ENST00000477556 SEMA3DO95025 777 aa12.03□□□□□ -0.48
PABPC4-212ENST00000477556 IL2RAP01589 272 aa12.03□□□□□ -0.48
PABPC4-212ENST00000477556 CLPSP04118 112 aa12.03□□□□□ -0.48
PABPC4-212ENST00000477556 KRT15P19012 456 aa12.03□□□□□ -0.48
PABPC4-212ENST00000477556 SSTR4P31391 388 aa12.03□□□□□ -0.48
PABPC4-212ENST00000477556 CEACAM8P31997 349 aaPredicted RBP12.03□□□□□ -0.48
PABPC4-212ENST00000477556 TIMP3P35625 211 aa12.03□□□□□ -0.48
PABPC4-212ENST00000477556 CDK9P50750 372 aaKnown RBP12.03□□□□□ -0.48
PABPC4-212ENST00000477556 FBXW4P57775 412 aa12.03□□□□□ -0.48
PABPC4-212ENST00000477556 PPP2R2AP63151 447 aa12.03□□□□□ -0.48
PABPC4-212ENST00000477556 IRF9Q00978 393 aa12.03□□□□□ -0.48
PABPC4-212ENST00000477556 CRYZQ08257 329 aaKnown RBP12.03□□□□□ -0.48
PABPC4-212ENST00000477556 TOMM20Q15388 145 aa12.03□□□□□ -0.48
PABPC4-212ENST00000477556 KRTAP21-3Q3LHN1 58 aa12.03□□□□□ -0.48
PABPC4-212ENST00000477556 METTL2BQ6P1Q9 378 aaKnown RBP12.03□□□□□ -0.48
PABPC4-212ENST00000477556 TMEM64Q6YI46 380 aa12.03□□□□□ -0.48
PABPC4-212ENST00000477556 SEM1Q6ZVN7 128 aa12.03□□□□□ -0.48
PABPC4-212ENST00000477556 GOLGA7Q7Z5G4 137 aa12.03□□□□□ -0.48
PABPC4-212ENST00000477556 GALNT12Q8IXK2 581 aa12.03□□□□□ -0.48
PABPC4-212ENST00000477556 ZNF441Q8N8Z8 693 aa12.03□□□□□ -0.48
PABPC4-212ENST00000477556 L3MBTL4Q8NA19 623 aa12.03□□□□□ -0.48
PABPC4-212ENST00000477556 TNIP2Q8NFZ5 429 aa12.03□□□□□ -0.48
PABPC4-212ENST00000477556 WDR20Q8TBZ3 569 aa12.03□□□□□ -0.48
PABPC4-212ENST00000477556 SPPL2AQ8TCT8 520 aa12.03□□□□□ -0.48
PABPC4-212ENST00000477556 ATP6V1E2Q96A05 226 aa12.03□□□□□ -0.48
PABPC4-212ENST00000477556 MRRFQ96E11 262 aaKnown RBP12.03□□□□□ -0.48
PABPC4-212ENST00000477556 RMND5BQ96G75 393 aaPredicted RBP12.03□□□□□ -0.48
PABPC4-212ENST00000477556 RILPQ96NA2 401 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms