RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 RASAL1O95294 804 aa16.37■□□□□ 0.21
PTPN7-209ENST00000477554 IGKV3-11P04433 115 aa16.37■□□□□ 0.21
PTPN7-209ENST00000477554 SP1P08047 785 aa16.37■□□□□ 0.21
PTPN7-209ENST00000477554 SOX18P35713 384 aa16.37■□□□□ 0.21
PTPN7-209ENST00000477554 CCNYL2Q5T2Q4 361 aa16.37■□□□□ 0.21
PTPN7-209ENST00000477554 NDUFAF5Q5TEU4 345 aa16.37■□□□□ 0.21
PTPN7-209ENST00000477554 CLEC6AQ6EIG7 209 aa16.37■□□□□ 0.21
PTPN7-209ENST00000477554 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.37■□□□□ 0.21
PTPN7-209ENST00000477554 TMEM132CQ8N3T6 1108 aa16.37■□□□□ 0.21
PTPN7-209ENST00000477554 CPSF7Q8N684 471 aaKnown RBP16.37■□□□□ 0.21
PTPN7-209ENST00000477554 BCORP1Q8N888 145 aa16.37■□□□□ 0.21
PTPN7-209ENST00000477554 ST6GALNAC3Q8NDV1 305 aa16.37■□□□□ 0.21
PTPN7-209ENST00000477554 OR14A16Q8NHC5 309 aa16.37■□□□□ 0.21
PTPN7-209ENST00000477554 NR4A3Q92570 626 aa16.37■□□□□ 0.21
PTPN7-209ENST00000477554 TANKQ92844 425 aa16.37■□□□□ 0.21
PTPN7-209ENST00000477554 TM4SF18Q96CE8 201 aa16.37■□□□□ 0.21
PTPN7-209ENST00000477554 SENP5Q96HI0 755 aaPredicted RBP16.37■□□□□ 0.21
PTPN7-209ENST00000477554 CCT7Q99832 543 aa16.37■□□□□ 0.21
PTPN7-209ENST00000477554 LYARQ9NX58 379 aaKnown RBP16.37■□□□□ 0.21
PTPN7-209ENST00000477554 MARCOQ9UEW3 520 aaPredicted RBP16.37■□□□□ 0.21
PTPN7-209ENST00000477554 FIS1Q9Y3D6 152 aa16.37■□□□□ 0.21
PTPN7-209ENST00000477554 SPACA6W5XKT8 324 aa16.37■□□□□ 0.21
PTPN7-209ENST00000477554 CROCCQ5TZA2 2017 aa16.37■□□□□ 0.21
PTPN7-209ENST00000477554 USP9YO00507 2555 aaPredicted RBP16.37■□□□□ 0.21
PTPN7-209ENST00000477554 POLEQ07864 2286 aa16.37■□□□□ 0.21
PTPN7-209ENST00000477554 PINLYPA6NC86 204 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 TRPC5OSA6NMA1 111 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 G3V3Y1 287 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 HDAC3O15379 428 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 ULK1O75385 1050 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 GPR75O95800 540 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 ALOX15P16050 662 aaPredicted RBP16.36■□□□□ 0.21
PTPN7-209ENST00000477554 DRD4P21917 467 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 TRHRP34981 398 aaPredicted RBP16.36■□□□□ 0.21
PTPN7-209ENST00000477554 BUD31P41223 144 aaPredicted RBP16.36■□□□□ 0.21
PTPN7-209ENST00000477554 SOX3P41225 446 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 HLCSP50747 726 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 ARFIP1P53367 373 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 GPR85P60893 370 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 ERVK-8P63133 956 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 RNF4P78317 190 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 SERTAD2Q14140 314 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 MAPKAPK3Q16644 382 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 PRSS53Q2L4Q9 553 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 UGT3A2Q3SY77 523 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 LGI4Q8N135 537 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 MORN4Q8NDC4 146 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 CHTF18Q8WVB6 975 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 FRMD6Q96NE9 622 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 DGAT2Q96PD7 388 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 RASL10BQ96S79 203 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 EBPLQ9BY08 206 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 TRIM45Q9H8W5 580 aaPredicted RBP16.36■□□□□ 0.21
PTPN7-209ENST00000477554 AGPAT4Q9NRZ5 378 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 DEPPQ9NTK1 212 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 MS4A12Q9NXJ0 267 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 HEY2Q9UBP5 337 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 CES1P1Q9UKY3 287 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 ERVK-19Q9WJR5 959 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 OSGIN2Q9Y236 505 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 DNAJC15Q9Y5T4 150 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 USH1CQ9Y6N9 552 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 TMEM233B4DJY2 109 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 ZFAND5O76080 213 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 SSTR4P31391 388 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 CYB561P49447 251 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 CBX1P83916 185 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 HSF1Q00613 529 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 BTKQ06187 659 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 ZNF267Q14586 743 aaPredicted RBP16.36■□□□□ 0.21
PTPN7-209ENST00000477554 FHL5Q5TD97 284 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 SLC25A25Q6KCM7 469 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 HSDL2Q6YN16 418 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 RNF165Q6ZSG1 346 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 TWIST2Q8WVJ9 160 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 DAZLQ92904 295 aaKnown RBP16.36■□□□□ 0.21
PTPN7-209ENST00000477554 CNPPD1Q9BV87 410 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 FAM107BQ9H098 131 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 BRF2Q9HAW0 419 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 NPHS2Q9NP85 383 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 ABI3Q9P2A4 366 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 MYOTQ9UBF9 498 aa16.36■□□□□ 0.21
PTPN7-209ENST00000477554 NME2P1O60361 137 aa16.35■□□□□ 0.21
PTPN7-209ENST00000477554 NME6O75414 186 aaPredicted RBP16.35■□□□□ 0.21
PTPN7-209ENST00000477554 AGFG2O95081 481 aa16.35■□□□□ 0.21
PTPN7-209ENST00000477554 FAM107AO95990 144 aa16.35■□□□□ 0.21
PTPN7-209ENST00000477554 EDN3P14138 238 aa16.35■□□□□ 0.21
PTPN7-209ENST00000477554 NME2P22392 152 aa16.35■□□□□ 0.21
PTPN7-209ENST00000477554 MAPK12P53778 367 aa16.35■□□□□ 0.21
PTPN7-209ENST00000477554 PDCD2Q16342 344 aaPredicted RBP16.35■□□□□ 0.21
PTPN7-209ENST00000477554 IL20RBQ6UXL0 311 aa16.35■□□□□ 0.21
PTPN7-209ENST00000477554 SUN3Q8TAQ9 357 aa16.35■□□□□ 0.21
PTPN7-209ENST00000477554 PSMG3-AS1Q96PY0 264 aa16.35■□□□□ 0.21
PTPN7-209ENST00000477554 CCT8L2Q96SF2 557 aa16.35■□□□□ 0.21
PTPN7-209ENST00000477554 KLHL14Q9P2G3 628 aa16.35■□□□□ 0.21
PTPN7-209ENST00000477554 VPS29Q9UBQ0 182 aa16.35■□□□□ 0.21
PTPN7-209ENST00000477554 ADAM29Q9UKF5 820 aa16.35■□□□□ 0.21
PTPN7-209ENST00000477554 SERTM1A2A2V5 107 aa16.34■□□□□ 0.21
PTPN7-209ENST00000477554 ASPDHA6ND91 283 aa16.34■□□□□ 0.21
PTPN7-209ENST00000477554 UNC5CO95185 931 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms