RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 B8ZZF3 427 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 NR5A2O00482 541 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 DYRK3O43781 588 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 HPP00738 406 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 ATP1B1P05026 303 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 LAMP1P11279 417 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 TNNI3P19429 210 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 EFNA1P20827 205 aaPredicted RBP14.31□□□□□ -0.12
SEC13-215ENST00000477547 GPX3P22352 226 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 IL12AP29459 219 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 KIR3DL1P43629 444 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 PGDP52209 483 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 NCBP2P52298 156 aaKnown RBP eCLIP14.31□□□□□ -0.12
SEC13-215ENST00000477547 HSPB3Q12988 150 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 BIKQ13323 160 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 TERF2Q15554 542 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 CEBPEQ15744 281 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 MPEG1Q2M385 716 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 OR4F3Q6IEY1 312 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 GALNT12Q8IXK2 581 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 OR9A2Q8NGT5 310 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 SUN3Q8TAQ9 357 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 THAP4Q8WY91 577 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 PPWD1Q96BP3 646 aaKnown RBP14.31□□□□□ -0.12
SEC13-215ENST00000477547 ZBED6CLQ96FA7 236 aaPredicted RBP14.31□□□□□ -0.12
SEC13-215ENST00000477547 RBM18Q96H35 190 aaKnown RBP14.31□□□□□ -0.12
SEC13-215ENST00000477547 WDR77Q9BQA1 342 aaPredicted RBP14.31□□□□□ -0.12
SEC13-215ENST00000477547 DUSP26Q9BV47 211 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 CNPPD1Q9BV87 410 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 BHLHE41Q9C0J9 482 aaPredicted RBP14.31□□□□□ -0.12
SEC13-215ENST00000477547 ZNF160Q9HCG1 818 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 CLCA3PQ9Y6N3 262 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 EXPH5Q8NEV8 1989 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 ARGFXA6NJG6 315 aa14.3□□□□□ -0.12
SEC13-215ENST00000477547 MYO1GB0I1T2 1018 aa14.3□□□□□ -0.12
SEC13-215ENST00000477547 K7ENP7 123 aa14.3□□□□□ -0.12
SEC13-215ENST00000477547 WISP1O95388 367 aa14.3□□□□□ -0.12
SEC13-215ENST00000477547 S100A3P33764 101 aa14.3□□□□□ -0.12
SEC13-215ENST00000477547 SLC26A5P58743 744 aa14.3□□□□□ -0.12
SEC13-215ENST00000477547 SRSF11Q05519 484 aaKnown RBP14.3□□□□□ -0.12
SEC13-215ENST00000477547 VAC14Q08AM6 782 aa14.3□□□□□ -0.12
SEC13-215ENST00000477547 UBAP2LQ14157 1087 aaKnown RBP14.3□□□□□ -0.12
SEC13-215ENST00000477547 SPRED3Q2MJR0 410 aa14.3□□□□□ -0.12
SEC13-215ENST00000477547 TIGD2Q4W5G0 525 aa14.3□□□□□ -0.12
SEC13-215ENST00000477547 GKAP1Q5VSY0 366 aaPredicted RBP14.3□□□□□ -0.12
SEC13-215ENST00000477547 INO80CQ6PI98 192 aaPredicted RBP14.3□□□□□ -0.12
SEC13-215ENST00000477547 DGAT2L6Q6ZPD8 337 aa14.3□□□□□ -0.12
SEC13-215ENST00000477547 NDUFAF7Q7L592 441 aa14.3□□□□□ -0.12
SEC13-215ENST00000477547 PIGWQ7Z7B1 504 aa14.3□□□□□ -0.12
SEC13-215ENST00000477547 CCDC116Q8IYX3 515 aa14.3□□□□□ -0.12
SEC13-215ENST00000477547 DOK4Q8TEW6 326 aa14.3□□□□□ -0.12
SEC13-215ENST00000477547 DAZLQ92904 295 aaKnown RBP14.3□□□□□ -0.12
SEC13-215ENST00000477547 RIT1Q92963 219 aa14.3□□□□□ -0.12
SEC13-215ENST00000477547 COQ8BQ96D53 544 aa14.3□□□□□ -0.12
SEC13-215ENST00000477547 ART5Q96L15 291 aa14.3□□□□□ -0.12
SEC13-215ENST00000477547 AMDHD1Q96NU7 426 aa14.3□□□□□ -0.12
SEC13-215ENST00000477547 TUBB6Q9BUF5 446 aa14.3□□□□□ -0.12
SEC13-215ENST00000477547 NMUR2Q9GZQ4 415 aa14.3□□□□□ -0.12
SEC13-215ENST00000477547 MRGBPQ9NV56 204 aa14.3□□□□□ -0.12
SEC13-215ENST00000477547 CCDC167Q9P0B6 97 aa14.3□□□□□ -0.12
SEC13-215ENST00000477547 ARL2BPQ9Y2Y0 163 aa14.3□□□□□ -0.12
SEC13-215ENST00000477547 COL12A1Q99715 3063 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 FAM234BA2RU67 622 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 MASP2O00187 686 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 SLC28A2O43868 658 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 GALNSP34059 522 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 MPIP34949 423 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 FRKP42685 505 aaPredicted RBP14.29□□□□□ -0.12
SEC13-215ENST00000477547 POLR2JP52435 117 aaKnown RBP14.29□□□□□ -0.12
SEC13-215ENST00000477547 DGKQP52824 942 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 RRADP55042 308 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 KCNK10P57789 538 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 RHDQ02161 417 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 CHAF1BQ13112 559 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 RCAN2Q14206 197 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 EXT1Q16394 746 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 DEFB109BQ30KR1 87 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 BTBD16Q32M84 506 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 AGKQ53H12 422 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 DCAF10Q5QP82 559 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 ZNF551Q7Z340 670 aaPredicted RBP14.29□□□□□ -0.12
SEC13-215ENST00000477547 VWA5B2Q8N398 1253 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 NATD1Q8N6N6 113 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 B3GNT7Q8NFL0 401 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 ADCY4Q8NFM4 1077 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 OR8J2Q8NGG1 315 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 SLC2A12Q8TD20 617 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 ZNF675Q8TD23 568 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 PTPMT1Q8WUK0 201 aaPredicted RBP14.29□□□□□ -0.12
SEC13-215ENST00000477547 WBP1Q96G27 269 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 FBXL20Q96IG2 436 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 FER1L6-AS2Q96M78 137 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 OR8D2Q9GZM6 311 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 GLIPR2Q9H4G4 154 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 CXorf21Q9HAI6 301 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 SAR1AQ9NR31 198 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 ACSS1Q9NUB1 689 aaPredicted RBP14.29□□□□□ -0.12
SEC13-215ENST00000477547 FAM120CQ9NX05 1096 aaKnown RBP14.29□□□□□ -0.12
SEC13-215ENST00000477547 MAT2BQ9NZL9 334 aa14.29□□□□□ -0.12
SEC13-215ENST00000477547 ERVK-19Q9WJR5 959 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms