RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 CTU2Q2VPK5 515 aaKnown RBP10.47□□□□□ -0.73
COL27A1-204ENST00000477421 GTF2IRD2BQ6EKJ0 949 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 SLC30A6Q6NXT4 461 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 MZT2BQ6NZ67 158 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 METTL2BQ6P1Q9 378 aaKnown RBP10.47□□□□□ -0.73
COL27A1-204ENST00000477421 PRSS48Q7RTY5 328 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 BCDIN3DQ7Z5W3 292 aaKnown RBP10.47□□□□□ -0.73
COL27A1-204ENST00000477421 GTF2IRD2Q86UP8 949 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 JAZF1Q86VZ6 243 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 GPR135Q8IZ08 494 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 OR9A2Q8NGT5 310 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 TMEM80Q96HE8 168 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 KCTD7Q96MP8 289 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 NIPSNAP1Q9BPW8 284 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 HDHD5Q9BXW7 423 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 ANKHQ9HCJ1 492 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 RLIMQ9NVW2 624 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 TNFRSF10DQ9UBN6 386 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 PMF1-BGLAPU3KQ54 211 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 NPIPA5A0A0B4J1W7 369 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 TCRBV5S2A0A599 114 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 NPIPA7E9PJI5 369 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 NPIPA8P0DM63 369 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 AHCYP23526 432 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 PCGF2P35227 344 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 ADARB1P78563 741 aaKnown RBP10.47□□□□□ -0.73
COL27A1-204ENST00000477421 FCHO2Q0JRZ9 810 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 WSCD2Q2TBF2 565 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 C6orf132Q5T0Z8 1188 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 HENMT1Q5T8I9 393 aaKnown RBP10.47□□□□□ -0.73
COL27A1-204ENST00000477421 Q6ZNB5 142 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 ANKRD33Q7Z3H0 272 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 PDZD3Q86UT5 571 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 PAPD5Q8NDF8 572 aaKnown RBP10.47□□□□□ -0.73
COL27A1-204ENST00000477421 B3GNT7Q8NFL0 401 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 OR4K14Q8NGD5 310 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 OR8J2Q8NGG1 315 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 OR2L2Q8NH16 312 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 ALG14Q96F25 216 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 ABCG4Q9H172 646 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 NLGN3Q9NZ94 848 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 MYOFQ9NZM1 2061 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 PRAMEF33A0A0G2JMD5 474 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 C2orf92A0A1B0GVN3 265 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 CCDC85CA6NKD9 419 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 PRAMEF10O60809 474 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 EN2P19622 333 aaPredicted RBP10.47□□□□□ -0.73
COL27A1-204ENST00000477421 DDCP20711 480 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 PXNP49023 591 aaPredicted RBP10.47□□□□□ -0.73
COL27A1-204ENST00000477421 DUSP7Q16829 419 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 SOWAHCQ53LP3 525 aaPredicted RBP10.47□□□□□ -0.73
COL27A1-204ENST00000477421 CCNJQ5T5M9 372 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 FAAH2Q6GMR7 532 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 SLC27A4Q6P1M0 643 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 B3GLCTQ6Y288 498 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 CXXC5Q7LFL8 322 aaKnown RBP10.47□□□□□ -0.73
COL27A1-204ENST00000477421 ACOT4Q8N9L9 421 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 OR56A1Q8NGH5 318 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 FAM46AQ96IP4 442 aaKnown RBP10.47□□□□□ -0.73
COL27A1-204ENST00000477421 TRNT1Q96Q11 434 aaKnown RBP10.47□□□□□ -0.73
COL27A1-204ENST00000477421 BEX2Q9BXY8 128 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 CXorf36Q9H7Y0 433 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 STARD5Q9NSY2 213 aa10.47□□□□□ -0.73
COL27A1-204ENST00000477421 SPTBP11277 2137 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 GFYI3L273 518 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 J3QLW9 94 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 PPM1DO15297 605 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 IFNGP01579 166 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 CTSLP07711 333 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 ZNF19P17023 458 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 NKX2-5P52952 324 aaPredicted RBP10.46□□□□□ -0.73
COL27A1-204ENST00000477421 TAS2R38P59533 333 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 CSTF1Q05048 431 aaKnown RBP10.46□□□□□ -0.73
COL27A1-204ENST00000477421 ZNF267Q14586 743 aaPredicted RBP10.46□□□□□ -0.73
COL27A1-204ENST00000477421 FBXO43Q4G163 708 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 PRPF38BQ5VTL8 546 aaKnown RBP10.46□□□□□ -0.73
COL27A1-204ENST00000477421 FRMPD2BQ6IN97 320 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 FBXO46Q6PJ61 603 aaPredicted RBP10.46□□□□□ -0.73
COL27A1-204ENST00000477421 FRRS1Q6ZNA5 592 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 C12orf40Q86WS4 652 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 CAMKVQ8NCB2 501 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 OR52E1Q8NGJ3 308 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 OR8J1Q8NGP2 316 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 ARSGQ96EG1 525 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 CRELD1Q96HD1 420 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 OR4K3Q96R72 315 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 MCCC1Q96RQ3 725 aaPredicted RBP10.46□□□□□ -0.73
COL27A1-204ENST00000477421 INSM2Q96T92 566 aaPredicted RBP10.46□□□□□ -0.73
COL27A1-204ENST00000477421 PHOX2BQ99453 314 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 NRTNQ99748 197 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 DSN1Q9H410 356 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 SFXN1Q9H9B4 322 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 NTN4Q9HB63 628 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 ACOT13Q9NPJ3 140 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 TMEM45AQ9NWC5 275 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 ZNF222Q9UK12 451 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 ENTPD6O75354 484 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 SOX30O94993 753 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 PSKH1P11801 424 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 GPX2P18283 190 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms