RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 FBRSL1Q9HCM7 1045 aaKnown RBP17.77■□□□□ 0.43
VARS2-209ENST00000477288 POLE4Q9NR33 117 aa17.77■□□□□ 0.43
VARS2-209ENST00000477288 SLITRK5O94991 958 aa17.77■□□□□ 0.43
VARS2-209ENST00000477288 DNAJB1P25685 340 aa17.77■□□□□ 0.43
VARS2-209ENST00000477288 INCA1Q0VD86 236 aa17.77■□□□□ 0.43
VARS2-209ENST00000477288 SHQ1Q6PI26 577 aaKnown RBP17.77■□□□□ 0.43
VARS2-209ENST00000477288 DPY19L4Q7Z388 723 aa17.77■□□□□ 0.43
VARS2-209ENST00000477288 POC1BQ8TC44 478 aa17.77■□□□□ 0.43
VARS2-209ENST00000477288 LRIG1Q96JA1 1093 aa17.77■□□□□ 0.43
VARS2-209ENST00000477288 F2RL3Q96RI0 385 aa17.77■□□□□ 0.43
VARS2-209ENST00000477288 PLEKHA3Q9HB20 300 aa17.77■□□□□ 0.43
VARS2-209ENST00000477288 MPPED1O15442 326 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 LATS1O95835 1130 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 PCLAFQ15004 111 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 PPP1R3AQ16821 1122 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 ZDHHC1Q8WTX9 485 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 PEX11GQ96HA9 241 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 NKX1-2Q9UD57 310 aaPredicted RBP17.76■□□□□ 0.43
VARS2-209ENST00000477288 INMT-MINDY4F8WBC2 141 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 IQCF3P0C7M6 154 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 RUNX3Q13761 415 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 CST6Q15828 149 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 COL28A1Q2UY09 1125 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 GLIS1Q8NBF1 620 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 SSX3Q99909 188 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 C8orf33Q9H7E9 229 aaPredicted RBP17.76■□□□□ 0.43
VARS2-209ENST00000477288 UBE2J1Q9Y385 318 aaPredicted RBP17.76■□□□□ 0.43
VARS2-209ENST00000477288 NOTOA8MTQ0 251 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 ABCB7O75027 752 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 MEDAGQ5VYS4 303 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 SLC16A5O15375 505 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 MAS1P04201 325 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 VIPR2P41587 438 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 GPR143P51810 404 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 HK3P52790 923 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 RAB4BP61018 213 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 CRYZQ08257 329 aaKnown RBP17.76■□□□□ 0.43
VARS2-209ENST00000477288 LHFPL3Q86UP9 236 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 TRIB2Q92519 343 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 HOXB13Q92826 284 aaPredicted RBP17.76■□□□□ 0.43
VARS2-209ENST00000477288 USB1Q9BQ65 265 aaKnown RBP17.76■□□□□ 0.43
VARS2-209ENST00000477288 OR1A2Q9Y585 309 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 KCPQ6ZWJ8 1503 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 C1orf226A1L170 272 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 DIRAS3O95661 229 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 TMEM35AQ53FP2 167 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 PLXDC1Q8IUK5 500 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 OR4N5Q8IXE1 308 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 SEC14L4Q9UDX3 406 aa17.76■□□□□ 0.43
VARS2-209ENST00000477288 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.75■□□□□ 0.43
VARS2-209ENST00000477288 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.75■□□□□ 0.43
VARS2-209ENST00000477288 ATP6V1G1O75348 118 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 KCNC4Q03721 635 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 KIAA0319Q5VV43 1072 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 CES4AQ5XG92 561 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 SLC27A4Q6P1M0 643 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 UNQ6126/PRO20091Q6UXV3 157 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 GABBR2O75899 941 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 C6P13671 934 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 AKR1C4P17516 323 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 PIGFQ07326 219 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 ELAVL3Q14576 367 aaKnown RBP17.75■□□□□ 0.43
VARS2-209ENST00000477288 FIGNL1Q6PIW4 674 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 ZNF773Q6PK81 442 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 ZNF761Q86XN6 746 aaPredicted RBP17.75■□□□□ 0.43
VARS2-209ENST00000477288 RXFP3Q9NSD7 469 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 ST14Q9Y5Y6 855 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 AP1M2Q9Y6Q5 423 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 VSTM2BA6NLU5 285 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 ENDOUP21128 410 aaKnown RBP17.75■□□□□ 0.43
VARS2-209ENST00000477288 NTSR1P30989 418 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 OR52P1PQ8NH57 321 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 ASB15Q8WXK1 588 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 OR5B12Q96R08 314 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 PELOQ9BRX2 385 aaKnown RBP17.75■□□□□ 0.43
VARS2-209ENST00000477288 FAM72CH0Y354 149 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 TIA1P31483 386 aaKnown RBP eCLIP17.75■□□□□ 0.435e-6■■■■■ 28.5
VARS2-209ENST00000477288 SLC35G1Q2M3R5 365 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 FAM72AQ5TYM5 149 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 FAM72DQ6L9T8 149 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 XKR5Q6UX68 686 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 AMIGO3Q86WK7 504 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 FAM72BQ86X60 149 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 OR14L1PQ8NHC6 308 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 SECISBP2Q96T21 854 aaKnown RBP17.75■□□□□ 0.43
VARS2-209ENST00000477288 MYNNQ9NPC7 610 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 HHEXQ03014 270 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 IL17RCQ8NAC3 791 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 GLYATL2Q8WU03 294 aa17.75■□□□□ 0.43
VARS2-209ENST00000477288 ACTL6BO94805 426 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 TBRG1Q3YBR2 411 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 KCNIP1Q9NZI2 227 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 DLG5Q8TDM6 1919 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 TRBV2A0A0J9YWF9 115 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 H7C2Y5 167 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 APBB3O95704 486 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 THBS2P35442 1172 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 PPA1Q15181 289 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 SLC36A3Q495N2 470 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 KIAA0895LQ68EN5 471 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms