RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 BIKQ13323 160 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 ZNF267Q14586 743 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-213ENST00000476777 TOMM20Q15388 145 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 SPRED3Q2MJR0 410 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 RNF111Q6ZNA4 994 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 C20orf204Q6ZNR8 217 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 ST13P4Q8IZP2 240 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-213ENST00000476777 TAGAPQ8N103 731 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 FAM83FQ8NEG4 500 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-213ENST00000476777 WNT2BQ93097 391 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 WDR34Q96EX3 536 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 PIK3IP1Q96FE7 263 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 CERS2Q96G23 380 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 UCN2Q96RP3 112 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 SECISBP2Q96T21 854 aaKnown RBP10.35□□□□□ -0.75
BRCA1-213ENST00000476777 G6PC3Q9BUM1 346 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 ERVK-6Q9BXR3 956 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 CAPS2Q9BXY5 557 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 MS4A8Q9BY19 250 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 PLAC1Q9HBJ0 212 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 TEX10Q9NXF1 929 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-213ENST00000476777 KLHL28Q9NXS3 571 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 FETUBQ9UGM5 382 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 PACSIN3Q9UKS6 424 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 CORO1CQ9ULV4 474 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-213ENST00000476777 ERVK-19Q9WJR5 959 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 EXPH5Q8NEV8 1989 aa10.35□□□□□ -0.75
BRCA1-213ENST00000476777 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 OR6C76A6NM76 312 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 CAPN14A8MX76 684 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 TAPBPO15533 448 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 BANF1O75531 89 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 TNFSF13O75888 250 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 ACTL6AO96019 429 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 PAX1P15863 534 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 ALOX15P16050 662 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-213ENST00000476777 CRYGSP22914 178 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 CXCR5P32302 372 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 PCYT1AP49585 367 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 DIO3P55073 304 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 DOC2AQ14183 400 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 CAPRIN1Q14444 709 aaKnown RBP10.34□□□□□ -0.75
BRCA1-213ENST00000476777 ZNF460Q14592 562 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 TSNQ15631 228 aaKnown RBP10.34□□□□□ -0.75
BRCA1-213ENST00000476777 AP5B1Q2VPB7 878 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 MSS51Q4VC12 460 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 SPANXN3Q5MJ09 141 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 TIGD3Q6B0B8 471 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 HMBOX1Q6NT76 420 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 FRA10AC1Q70Z53 315 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 ADAMTSL2Q86TH1 951 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 YRDCQ86U90 279 aaKnown RBP10.34□□□□□ -0.75
BRCA1-213ENST00000476777 IGDCC3Q8IVU1 814 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 GCNT2Q8N0V5 402 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 NKAPQ8N5F7 415 aaKnown RBP10.34□□□□□ -0.75
BRCA1-213ENST00000476777 ZNF473Q8WTR7 871 aaKnown RBP10.34□□□□□ -0.75
BRCA1-213ENST00000476777 ANKRD49Q8WVL7 239 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 IGFBPL1Q8WX77 278 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 TANKQ92844 425 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 PTCD3Q96EY7 689 aaKnown RBP10.34□□□□□ -0.75
BRCA1-213ENST00000476777 TMEM41AQ96HV5 264 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 VPS39Q96JC1 886 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 MARK4Q96L34 752 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 PIGQQ9BRB3 760 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 TMEM79Q9BSE2 394 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 EFCAB11Q9BUY7 163 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 ACBD3Q9H3P7 528 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 RPF2Q9H7B2 306 aaKnown RBP10.34□□□□□ -0.75
BRCA1-213ENST00000476777 DNAJC11Q9NVH1 559 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 ZNF226Q9NYT6 803 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 CLCF1Q9UBD9 225 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 WIF1Q9Y5W5 379 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 CADP27708 2225 aa10.34□□□□□ -0.75
BRCA1-213ENST00000476777 C2orf92A0A1B0GVN3 265 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 NCF1BA6NI72 391 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-213ENST00000476777 WASHC1A8K0Z3 465 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 NCF1CA8MVU1 366 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-213ENST00000476777 H0Y3Z8 333 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 GNB5O14775 395 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 CLGNO14967 610 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 SH3BGRLO75368 114 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 PRKRAO75569 313 aaKnown RBP10.33□□□□□ -0.76
BRCA1-213ENST00000476777 NID1P14543 1247 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 NCF1P14598 390 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-213ENST00000476777 PTMSP20962 102 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 LOXP28300 417 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-213ENST00000476777 GGT5P36269 586 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 CPOXP36551 454 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 CASP2P42575 452 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 SRYQ05066 204 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 SLAMF1Q13291 335 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 GAB1Q13480 694 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 TGFBIQ15582 683 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 TMEM35AQ53FP2 167 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 FBXO48Q5FWF7 155 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 RNASEH2BQ5TBB1 312 aaKnown RBP10.33□□□□□ -0.76
BRCA1-213ENST00000476777 C18orf63Q68DL7 685 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 HEPHL1Q6MZM0 1159 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 TRMT10BQ6PF06 316 aaKnown RBP10.33□□□□□ -0.76
BRCA1-213ENST00000476777 PPIL6Q8IXY8 311 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms