RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 MPPE1Q53F39 396 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 ZNF385BQ569K4 471 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 FAM27D1Q5T7N8 215 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 NXNL2Q5VZ03 156 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 SLC8B1Q6J4K2 584 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 MRPL10Q7Z7H8 261 aaKnown RBP4.74□□□□□ -1.65
CCDC39-204ENST00000476379 COMMD2Q86X83 199 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 MSRB3Q8IXL7 192 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 SVOPLQ8N434 492 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 S100ZQ8WXG8 99 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 GGHQ92820 318 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 TANKQ92844 425 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 CCDC120Q96HB5 630 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 C1orf74Q96LT6 269 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 CDX2Q99626 313 aaPredicted RBP4.74□□□□□ -1.65
CCDC39-204ENST00000476379 SLC30A2Q9BRI3 323 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 TPSD1Q9BZJ3 242 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 SLAMF7Q9NQ25 335 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 ENPP5Q9UJA9 477 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 IKZF2Q9UKS7 526 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 FBXL3Q9UKT7 428 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 PPIEQ9UNP9 301 aaKnown RBP4.74□□□□□ -1.65
CCDC39-204ENST00000476379 A0A1W2PP55 124 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 SH3D21A4FU49 640 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 ZSCAN5BA6NJL1 495 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 FAM170BA6NMN3 283 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 YY2O15391 372 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 AQP9O43315 295 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 EEF1E1O43324 174 aaKnown RBP4.74□□□□□ -1.65
CCDC39-204ENST00000476379 SCN2BO60939 215 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 OAZ2O95190 189 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 PAHP00439 452 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 IFNA14P01570 189 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 PRPS2P11908 318 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 PVRP15151 417 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 AK4P27144 223 aaPredicted RBP4.74□□□□□ -1.65
CCDC39-204ENST00000476379 GSTM2P28161 218 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 GRK5P34947 590 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 VASPP50552 380 aaPredicted RBP4.74□□□□□ -1.65
CCDC39-204ENST00000476379 AKR1D1P51857 326 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 HCCSP53701 268 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 SUZ12Q15022 739 aaKnown RBP4.74□□□□□ -1.65
CCDC39-204ENST00000476379 MINDY4Q4G0A6 757 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 ZNF311Q5JNZ3 666 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 PRAMEF13Q5VWM6 474 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 PHYKPLQ8IUZ5 450 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 OR8S1Q8NH09 359 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 THAP3Q8WTV1 239 aaPredicted RBP4.74□□□□□ -1.65
CCDC39-204ENST00000476379 RSPRY1Q96DX4 576 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 GDF15Q99988 308 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 IFT27Q9BW83 186 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 DPEP2Q9H4A9 486 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 TEX10Q9NXF1 929 aaPredicted RBP4.74□□□□□ -1.65
CCDC39-204ENST00000476379 LHX3Q9UBR4 397 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 OARD1Q9Y530 152 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 PCDHGB6Q9Y5F9 930 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 SPTBN1Q01082 2364 aaKnown RBP4.74□□□□□ -1.65
CCDC39-204ENST00000476379 TRPM6Q9BX84 2022 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 TCRBV5S2A0A599 114 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 IGLON5A6NGN9 336 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 I3L521 148 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 WNT9AO14904 365 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 PRICKLE3O43900 615 aaPredicted RBP4.74□□□□□ -1.65
CCDC39-204ENST00000476379 MATN4O95460 622 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 CXCL10P02778 98 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 PROS1P07225 676 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 HTR1AP08908 422 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 ATF4P18848 351 aaPredicted RBP4.74□□□□□ -1.65
CCDC39-204ENST00000476379 AHCYP23526 432 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 AOAHP28039 575 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 NTSP30990 170 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 HTR2BP41595 481 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 EIF1AXP47813 144 aaKnown RBP4.74□□□□□ -1.65
CCDC39-204ENST00000476379 FNTBP49356 437 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 TMBIM6P55061 237 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 CLDN8P56748 225 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 HYAL1Q12794 435 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 STX4Q12846 297 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 ERV3-1Q14264 604 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 HEPACAMQ14CZ8 416 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 LTB4RQ15722 352 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 XAF1Q6GPH4 301 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 FAM160A2Q8N612 972 aaPredicted RBP4.74□□□□□ -1.65
CCDC39-204ENST00000476379 SAMD12Q8N8I0 201 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 REPS1Q96D71 796 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 CDK5RAP1Q96SZ6 601 aaKnown RBP4.74□□□□□ -1.65
CCDC39-204ENST00000476379 SECISBP2Q96T21 854 aaKnown RBP4.74□□□□□ -1.65
CCDC39-204ENST00000476379 SAP130Q9H0E3 1048 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 KCNH6Q9H252 994 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 RC3H2Q9HBD1 1191 aaKnown RBP4.74□□□□□ -1.65
CCDC39-204ENST00000476379 DEC1Q9P2X7 70 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 EIF3KQ9UBQ5 218 aaKnown RBP4.74□□□□□ -1.65
CCDC39-204ENST00000476379 ZNF510Q9Y2H8 683 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 IFT52Q9Y366 437 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 A0A0G2JMZ2 1700 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 CACNA1AO00555 2505 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.74□□□□□ -1.65
CCDC39-204ENST00000476379 ZNF487B1APH4 448 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 LDB3O75112 727 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 KCNK5O95279 499 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms