RNA–Protein interactions for RNA: ENST00000476061.5

PTPN7-208, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-208ENST00000476061 RBP1P09455 135 aa9.12□□□□□ -0.95
PTPN7-208ENST00000476061 FREM3P0C091 2139 aa9.12□□□□□ -0.95
PTPN7-208ENST00000476061 COL6A2P12110 1019 aa9.12□□□□□ -0.95
PTPN7-208ENST00000476061 ECHS1P30084 290 aa9.12□□□□□ -0.95
PTPN7-208ENST00000476061 PEX19P40855 299 aa9.12□□□□□ -0.95
PTPN7-208ENST00000476061 MAGEA12P43365 314 aa9.12□□□□□ -0.95
PTPN7-208ENST00000476061 KCNJ2P63252 427 aa9.12□□□□□ -0.95
PTPN7-208ENST00000476061 FUT7Q11130 342 aa9.12□□□□□ -0.95
PTPN7-208ENST00000476061 ZNF267Q14586 743 aaPredicted RBP9.12□□□□□ -0.95
PTPN7-208ENST00000476061 GGTA1PQ4G0N0 100 aa9.12□□□□□ -0.95
PTPN7-208ENST00000476061 C1orf185Q5T7R7 199 aa9.12□□□□□ -0.95
PTPN7-208ENST00000476061 RIPPLY2Q5TAB7 128 aa9.12□□□□□ -0.95
PTPN7-208ENST00000476061 CES4AQ5XG92 561 aa9.12□□□□□ -0.95
PTPN7-208ENST00000476061 CDH24Q86UP0 819 aa9.12□□□□□ -0.95
PTPN7-208ENST00000476061 CCDC71Q8IV32 467 aaPredicted RBP9.12□□□□□ -0.95
PTPN7-208ENST00000476061 ZNF441Q8N8Z8 693 aa9.12□□□□□ -0.95
PTPN7-208ENST00000476061 C17orf47Q8NEP4 570 aa9.12□□□□□ -0.95
PTPN7-208ENST00000476061 OR5M9Q8NGP3 310 aa9.12□□□□□ -0.95
PTPN7-208ENST00000476061 FMO2Q99518 471 aa9.12□□□□□ -0.95
PTPN7-208ENST00000476061 CNPPD1Q9BV87 410 aa9.12□□□□□ -0.95
PTPN7-208ENST00000476061 UCK2Q9BZX2 261 aa9.12□□□□□ -0.95
PTPN7-208ENST00000476061 NOL11Q9H8H0 719 aaKnown RBP9.12□□□□□ -0.95
PTPN7-208ENST00000476061 AHSPQ9NZD4 102 aa9.12□□□□□ -0.95
PTPN7-208ENST00000476061 B4GALT7Q9UBV7 327 aa9.12□□□□□ -0.95
PTPN7-208ENST00000476061 ACAD8Q9UKU7 415 aa9.12□□□□□ -0.95
PTPN7-208ENST00000476061 CNOT11Q9UKZ1 510 aaKnown RBP9.12□□□□□ -0.95
PTPN7-208ENST00000476061 RNF11Q9Y3C5 154 aa9.12□□□□□ -0.95
PTPN7-208ENST00000476061 CENPEQ02224 2701 aa9.12□□□□□ -0.95
PTPN7-208ENST00000476061 FBN2P35556 2912 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 A0A0G2JNJ9 132 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 LRRC14BA6NHZ5 514 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 LRRC3CA6NJW4 275 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 AHRRA9YTQ3 701 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 TP53I11O14683 189 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 CDH16O75309 829 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 GUCY1B2O75343 617 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 TRIM3O75382 744 aaPredicted RBP9.11□□□□□ -0.95
PTPN7-208ENST00000476061 PRKRAO75569 313 aaKnown RBP9.11□□□□□ -0.95
PTPN7-208ENST00000476061 SNX4O95219 450 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 SIX3O95343 332 aaPredicted RBP9.11□□□□□ -0.95
PTPN7-208ENST00000476061 RFPL3SP0C7P2 107 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 ENDOUP21128 410 aaKnown RBP9.11□□□□□ -0.95
PTPN7-208ENST00000476061 CNTFP26441 200 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 PIK3R1P27986 724 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 TMED10P49755 219 aaKnown RBP9.11□□□□□ -0.95
PTPN7-208ENST00000476061 SERPINB9P50453 376 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 NEK2P51955 445 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 RIPPLY3P57055 190 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 RPS6KA2Q15349 733 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 TSNAXIP1Q2TAA8 658 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 SLC25A35Q3KQZ1 300 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 PRAMEF20Q5VT98 475 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 FRG2Q64ET8 278 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 TMEM198Q66K66 360 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 TMEM81Q6P7N7 255 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 PAGE2Q7Z2X7 111 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 GALNT12Q8IXK2 581 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 PLD6Q8N2A8 252 aaKnown RBP9.11□□□□□ -0.95
PTPN7-208ENST00000476061 FAM13CQ8NE31 585 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 OR7G1Q8NGA0 311 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 OR10G3Q8NGC4 313 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 OR4K14Q8NGD5 310 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 OR10Q1Q8NGQ4 319 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 NEIL3Q8TAT5 605 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 SLC44A1Q8WWI5 657 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 SREK1Q8WXA9 508 aaKnown RBP9.11□□□□□ -0.95
PTPN7-208ENST00000476061 ATP6V1E2Q96A05 226 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 NTNG2Q96CW9 530 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 FRG2BQ96QU4 278 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 GAL3ST4Q96RP7 486 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 ZNF559Q9BR84 538 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 DOHHQ9BU89 302 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 C1QTNF3Q9BXJ4 246 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 VPS11Q9H270 941 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 EXO5Q9H790 373 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 CXorf21Q9HAI6 301 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 NINJ2Q9NZG7 142 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 CPSF2Q9P2I0 782 aaKnown RBP9.11□□□□□ -0.95
PTPN7-208ENST00000476061 SPRR3Q9UBC9 169 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 Q9UFV3 132 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 PCTPQ9UKL6 214 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 ITGB1BP2Q9UKP3 347 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 NFU1Q9UMS0 254 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 NPFFR2Q9Y5X5 522 aa9.11□□□□□ -0.95
PTPN7-208ENST00000476061 C1orf226A1L170 272 aa9.1□□□□□ -0.95
PTPN7-208ENST00000476061 GLOD5A6NK44 160 aa9.1□□□□□ -0.95
PTPN7-208ENST00000476061 WASHC1A8K0Z3 465 aa9.1□□□□□ -0.95
PTPN7-208ENST00000476061 HSPB2A8KAH6 182 aa9.1□□□□□ -0.95
PTPN7-208ENST00000476061 PGRMC2O15173 223 aa9.1□□□□□ -0.95
PTPN7-208ENST00000476061 SMIM24O75264 130 aa9.1□□□□□ -0.95
PTPN7-208ENST00000476061 KRT38O76015 456 aa9.1□□□□□ -0.95
PTPN7-208ENST00000476061 HPNP05981 417 aa9.1□□□□□ -0.95
PTPN7-208ENST00000476061 INHBAP08476 426 aa9.1□□□□□ -0.95
PTPN7-208ENST00000476061 NAGAP17050 411 aa9.1□□□□□ -0.95
PTPN7-208ENST00000476061 CCNG1P51959 295 aa9.1□□□□□ -0.95
PTPN7-208ENST00000476061 NRG3P56975 720 aa9.1□□□□□ -0.95
PTPN7-208ENST00000476061 RPP38P78345 283 aaKnown RBP9.1□□□□□ -0.95
PTPN7-208ENST00000476061 TRAF3Q13114 568 aa9.1□□□□□ -0.95
PTPN7-208ENST00000476061 SF3B4Q15427 424 aaKnown RBP eCLIP9.1□□□□□ -0.95
PTPN7-208ENST00000476061 HSPB2Q16082 182 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms