RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 ZNF79Q15937 498 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 EXOC3L2Q2M3D2 409 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 BCL7AQ4VC05 210 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 SOWAHCQ53LP3 525 aaPredicted RBP6.51□□□□□ -1.37
UBR4-212ENST00000475973 SAXO2Q658L1 398 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 ACSM2BQ68CK6 577 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 KIAA1211LQ6NV74 962 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 C22orf39Q6P5X5 142 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 FIGNL1Q6PIW4 674 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 AGTRAPQ6RW13 159 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 KLHL17Q6TDP4 642 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 SERPINA13PQ6UXR4 307 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 RFLNAQ6ZTI6 216 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 USP45Q70EL2 814 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 GALNT10Q86SR1 603 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 C11orf74Q86VG3 221 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 GALNT12Q8IXK2 581 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 LGI4Q8N135 537 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 RNF175Q8N4F7 328 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 OXR1Q8N573 874 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 FAM26EQ8N5C1 309 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 CLDN22Q8N7P3 220 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 NANOGP1Q8N7R0 232 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 POC5Q8NA72 575 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 SIMC1Q8NDZ2 872 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 VPS37AQ8NEZ2 397 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 TSTD1Q8NFU3 115 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 RPLP0P6Q8NHW5 317 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 ASZ1Q8WWH4 475 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 TMCO6Q96DC7 493 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 ZC3HAV1LQ96H79 300 aaKnown RBP6.51□□□□□ -1.37
UBR4-212ENST00000475973 PPP1R16AQ96I34 528 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 HIST1H2AHQ96KK5 128 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 LINC00615Q96LM1 132 aaPredicted RBP6.51□□□□□ -1.37
UBR4-212ENST00000475973 OR5M11Q96RB7 305 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 HIST1H2AJQ99878 128 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 MYOCQ99972 504 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 H2AFJQ9BTM1 129 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 YIPF2Q9BWQ6 316 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 ZNF717Q9BY31 904 aaPredicted RBP6.51□□□□□ -1.37
UBR4-212ENST00000475973 KLHL25Q9H0H3 589 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 TPK1Q9H3S4 243 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 C12orf49Q9H741 205 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 A4GALTQ9NPC4 353 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 PCDH12Q9NPG4 1184 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 POLE4Q9NR33 117 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 RAD18Q9NS91 495 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 SEMA4GQ9NTN9 838 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 NDUFB11Q9NX14 153 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 GPR83Q9NYM4 423 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 EHD3Q9NZN3 535 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 TBC1D14Q9P2M4 693 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 DKK3Q9UBP4 350 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 B4GALT6Q9UBX8 382 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 SEC14L4Q9UDX3 406 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 KLF15Q9UIH9 416 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 SLC6A14Q9UN76 642 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 STUB1Q9UNE7 303 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 SF3B6Q9Y3B4 125 aaKnown RBP6.51□□□□□ -1.37
UBR4-212ENST00000475973 N6AMT1Q9Y5N5 214 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 MTCL1Q9Y4B5 1905 aaKnown RBP6.5□□□□□ -1.37
UBR4-212ENST00000475973 HYKKA2RU49 373 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 MYO1GB0I1T2 1018 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 CTDSP2O14595 271 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 PCDH17O14917 1159 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 EREGO14944 169 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 ATXN7O15265 892 aaPredicted RBP6.5□□□□□ -1.37
UBR4-212ENST00000475973 KIAA0513O60268 411 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 TPST2O60704 377 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 MFN2O95140 757 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 LRATO95237 230 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 GASTP01350 101 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 IFNA14P01570 189 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 IL1AP01583 271 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 APODP05090 189 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 HBQ1P09105 142 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 ANXA4P09525 319 aaPredicted RBP6.5□□□□□ -1.37
UBR4-212ENST00000475973 OSMP13725 252 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 ETFAP13804 333 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 NPPBP16860 134 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 FGF9P31371 208 aaPredicted RBP6.5□□□□□ -1.37
UBR4-212ENST00000475973 GKP32189 559 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 CD70P32970 193 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 CSTF2P33240 577 aaKnown RBP eCLIP6.5□□□□□ -1.37
UBR4-212ENST00000475973 RPS19P39019 145 aaKnown RBP6.5□□□□□ -1.37
UBR4-212ENST00000475973 ARFIP1P53367 373 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 PCBP4P57723 403 aaKnown RBP6.5□□□□□ -1.37
UBR4-212ENST00000475973 PSPHP78330 225 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 CDK6Q00534 326 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 CHRNEQ04844 493 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 ACSM1Q08AH1 577 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 DMWDQ09019 674 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 ZNF763Q0D2J5 394 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 SRSF5Q13243 272 aaKnown RBP6.5□□□□□ -1.37
UBR4-212ENST00000475973 TPBGQ13641 420 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 SCARB2Q14108 478 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 DMC1Q14565 340 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 CSRP2Q16527 193 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 FLYWCH1Q4VC44 716 aa6.5□□□□□ -1.37
UBR4-212ENST00000475973 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms