RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 OR4D11Q8NGI4 311 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 BAHD1Q8TBE0 780 aaPredicted RBP9.25□□□□□ -0.93
USP39-214ENST00000474572 FAR1Q8WVX9 515 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 HMGB4Q8WW32 186 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 IPCEF1Q8WWN9 437 aaPredicted RBP9.25□□□□□ -0.93
USP39-214ENST00000474572 GIMAP5Q96F15 307 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 ABHD8Q96I13 439 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 TREX2Q9BQ50 279 aaPredicted RBP9.25□□□□□ -0.93
USP39-214ENST00000474572 BCL7BQ9BQE9 202 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 PHF7Q9BWX1 381 aaPredicted RBP9.25□□□□□ -0.93
USP39-214ENST00000474572 GPN2Q9H9Y4 310 aaPredicted RBP9.25□□□□□ -0.93
USP39-214ENST00000474572 EVA1BQ9NVM1 165 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 RLIMQ9NVW2 624 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 FKBP14Q9NWM8 211 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 SCN3BQ9NY72 215 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 FTSJ1Q9UET6 329 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 NDOR1Q9UHB4 597 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 ENOPH1Q9UHY7 261 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 RNF6Q9Y252 685 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 SH3GLB1Q9Y371 365 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 FAM32AQ9Y421 112 aaKnown RBP9.25□□□□□ -0.93
USP39-214ENST00000474572 PCDHGA10Q9Y5H3 936 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 SNX5Q9Y5X3 404 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 REV3LO60673 3130 aa9.25□□□□□ -0.93
USP39-214ENST00000474572 A0A0G2JPF8 293 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 A0A0J9YY10 115 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 A0A1W2PPC4 97 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 OR6C74A6NCV1 312 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 TMEM247A6NEH6 219 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 ZAR1LA6NP61 321 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 ZNF99A8MXY4 864 aaPredicted RBP9.24□□□□□ -0.93
USP39-214ENST00000474572 HNRNPCL2B2RXH8 293 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 HNRNPCL3B7ZW38 293 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 SYT5O00445 386 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 PCDH17O14917 1159 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 CASC3O15234 703 aaKnown RBP9.24□□□□□ -0.93
USP39-214ENST00000474572 SLC28A2O43868 658 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 XPNPEP2O43895 674 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 ERAL1O75616 437 aaKnown RBP9.24□□□□□ -0.93
USP39-214ENST00000474572 SERPINB7O75635 380 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 SLITRK5O94991 958 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 ADAP00813 363 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 VIPP01282 170 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 HMGN2P05204 90 aaKnown RBP9.24□□□□□ -0.93
USP39-214ENST00000474572 CHRM4P08173 479 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 HNRNPCL4P0DMR1 293 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 POLR2CP19387 275 aaPredicted RBP9.24□□□□□ -0.93
USP39-214ENST00000474572 FUT4P22083 530 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 ELAVL4P26378 380 aaKnown RBP9.24□□□□□ -0.93
USP39-214ENST00000474572 PPP2R1BP30154 601 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 FMO3P31513 532 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 MPIP34949 423 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 KRT20P35900 424 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 BUD31P41223 144 aaPredicted RBP9.24□□□□□ -0.93
USP39-214ENST00000474572 LSSP48449 732 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 MASP1P48740 699 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 BTN3A2P78410 334 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 PRR5P85299 388 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 IL1RL1Q01638 556 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 EMX1Q04741 257 aaPredicted RBP9.24□□□□□ -0.93
USP39-214ENST00000474572 FZD2Q14332 565 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 GNA13Q14344 377 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 ZNF750Q32MQ0 723 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 CYP27C1Q4G0S4 372 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 SYT6Q5T7P8 510 aaPredicted RBP9.24□□□□□ -0.93
USP39-214ENST00000474572 HEPHL1Q6MZM0 1159 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 Q6ZS52 159 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 PRSS48Q7RTY5 328 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 KRT73Q86Y46 540 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 TRIM48Q8IWZ4 208 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 CCDC116Q8IYX3 515 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 SAMD14Q8IZD0 417 aaPredicted RBP9.24□□□□□ -0.93
USP39-214ENST00000474572 DEPDC4Q8N2C3 294 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 SVOPQ8N4V2 548 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 CAMKVQ8NCB2 501 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 OR9Q2Q8NGE9 314 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 OR5D16Q8NGK9 328 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 RHOXF1Q8NHV9 184 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 RAB2BQ8WUD1 216 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 PROX1Q92786 737 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 ELP4Q96EB1 424 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 TOE1Q96GM8 510 aaKnown RBP9.24□□□□□ -0.93
USP39-214ENST00000474572 COL21A1Q96P44 957 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 FCRL4Q96PJ5 515 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 ALPK1Q96QP1 1244 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 OR7D2Q96RA2 312 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 ZFYVE21Q9BQ24 234 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 SPATA5L1Q9BVQ7 753 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 NAA50Q9GZZ1 169 aaKnown RBP9.24□□□□□ -0.93
USP39-214ENST00000474572 TCEAL2Q9H3H9 227 aaPredicted RBP9.24□□□□□ -0.93
USP39-214ENST00000474572 LIN28AQ9H9Z2 209 aaKnown RBP9.24□□□□□ -0.93
USP39-214ENST00000474572 NMNAT1Q9HAN9 279 aaPredicted RBP9.24□□□□□ -0.93
USP39-214ENST00000474572 C3orf14Q9HBI5 128 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 LYRM4Q9HD34 91 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 GIMAP4Q9NUV9 329 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 DNAAF2Q9NVR5 837 aaKnown RBP9.24□□□□□ -0.93
USP39-214ENST00000474572 MS4A12Q9NXJ0 267 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 CPNE7Q9UBL6 633 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 PSME2Q9UL46 239 aa9.24□□□□□ -0.93
USP39-214ENST00000474572 DAPP1Q9UN19 280 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms