RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 DPP4P27487 766 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 AXLP30530 894 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 IFNAR2P48551 515 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 NPY2RP49146 381 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 CRYBA2P53672 197 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 OVGP1Q12889 678 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 P2RY14Q15391 338 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 PARP6Q2NL67 630 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 KLHL40Q2TBA0 621 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 LRRC23Q53EV4 343 aaPredicted RBP3.66□□□□□ -1.82
BRCA1-212ENST00000473961 LCLAT1Q6UWP7 414 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 P4HA3Q7Z4N8 544 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 LINC00518Q8N0U6 118 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 TRIM58Q8NG06 486 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 OR10G7Q8NGN6 311 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 FBXO25Q8TCJ0 367 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 LIPHQ8WWY8 451 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 ANKRD7Q92527 254 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 FBXO17Q96EF6 278 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 ZNF486Q96H40 463 aaPredicted RBP3.66□□□□□ -1.82
BRCA1-212ENST00000473961 COG3Q96JB2 828 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 F2RL3Q96RI0 385 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 TSPAN18Q96SJ8 248 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 MYCBPQ99417 103 aaPredicted RBP3.66□□□□□ -1.82
BRCA1-212ENST00000473961 TXN2Q99757 166 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 YAE1D1Q9NRH1 226 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 TUBGCP4Q9UGJ1 667 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 ATP6V1HQ9UI12 483 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 SNX6Q9UNH7 406 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 SLC9A8Q9Y2E8 581 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 MRPS7Q9Y2R9 242 aaKnown RBP3.66□□□□□ -1.82
BRCA1-212ENST00000473961 ZNF175Q9Y473 711 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 ARHGAP31Q2M1Z3 1444 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 AFF2P51816 1311 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 KIF7Q2M1P5 1343 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 RAD50Q92878 1312 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 CECR2Q9BXF3 1484 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 NPC1L1Q9UHC9 1359 aa3.65□□□□□ -1.82
BRCA1-212ENST00000473961 SPATA31E1Q6ZUB1 1445 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 H3BTX0 84 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 TRAFD1O14545 582 aaPredicted RBP3.65□□□□□ -1.83
BRCA1-212ENST00000473961 SH2D1BO14796 132 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 CSO75390 466 aaKnown RBP3.65□□□□□ -1.83
BRCA1-212ENST00000473961 RHOBTB1O94844 696 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 NDUFA7O95182 113 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 ANP32DO95626 131 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 FAM200BP0CF97 657 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 KRT13P13646 458 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 GNB3P16520 340 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 CAPN2P17655 700 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 CALML3P27482 149 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 HTR2AP28223 471 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 PTPN6P29350 595 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 TIMP3P35625 211 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 SOX6P35712 828 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 GTF2A1P52655 376 aaPredicted RBP3.65□□□□□ -1.83
BRCA1-212ENST00000473961 LINC01547P58512 204 aaPredicted RBP3.65□□□□□ -1.83
BRCA1-212ENST00000473961 BTG1P62324 171 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 NOP14P78316 857 aaKnown RBP3.65□□□□□ -1.83
BRCA1-212ENST00000473961 IL9RQ01113 521 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 ELP6Q0PNE2 266 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 RAPSNQ13702 412 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 KLF5Q13887 457 aaPredicted RBP3.65□□□□□ -1.83
BRCA1-212ENST00000473961 CLPPQ16740 277 aaPredicted RBP3.65□□□□□ -1.83
BRCA1-212ENST00000473961 POM121L1PQ3SYA9 428 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 HSP90AB3PQ58FF7 597 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 FAM76BQ5HYJ3 339 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 SLC25A24Q6NUK1 477 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 MEX3BQ6ZN04 569 aaKnown RBP3.65□□□□□ -1.83
BRCA1-212ENST00000473961 DPY19L2P2Q6ZN68 376 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 FRRS1Q6ZNA5 592 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 Q6ZSR9 355 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 GPR142Q7Z601 462 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 ADGRD2Q7Z7M1 963 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 OR4N5Q8IXE1 308 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 TBC1D21Q8IYX1 336 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 PYROXD2Q8N2H3 581 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 MNS1Q8NEH6 495 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 NUP37Q8NFH4 326 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 TMEM190Q8WZ59 177 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 RAB7BQ96AH8 199 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 LRR1Q96L50 414 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 DEFB118Q96PH6 123 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 DUX3Q96PT4 197 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 NODALQ96S42 347 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 RAB11FIP5Q9BXF6 653 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 NT5C3AQ9H0P0 336 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 DCTPP1Q9H773 170 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 WDR76Q9H967 626 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 PANK3Q9H999 370 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 ATAD3AQ9NVI7 634 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 RBM28Q9NW13 759 aaKnown RBP3.65□□□□□ -1.83
BRCA1-212ENST00000473961 MIOXQ9UGB7 285 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 CIDEBQ9UHD4 219 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 LAMP5Q9UJQ1 280 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 SLC6A5Q9Y345 797 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 MFHAS1Q9Y4C4 1052 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 ATG4BQ9Y4P1 393 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 SCRIBQ14160 1630 aa3.65□□□□□ -1.83
BRCA1-212ENST00000473961 CCDC18Q5T9S5 1454 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms