RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 ANK3Q12955 4377 aaKnown RBP8.77□□□□□ -1.01
MCF2L-223ENST00000473345 JMJD1CQ15652 2540 aa8.77□□□□□ -1.01
MCF2L-223ENST00000473345 CUBNO60494 3623 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 ZANQ9Y493 2812 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 ANKRD33BA6NCL7 494 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 LRRC14BA6NHZ5 514 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 GNB5O14775 395 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 PGRMC2O15173 223 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 TRAPPC6AO75865 159 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 NID1P14543 1247 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 CD1DP15813 335 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 S1PR1P21453 382 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 OPRM1P35372 400 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 CASP3P42574 277 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 CASP2P42575 452 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 HNMTP50135 292 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 SORDQ00796 357 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 CHIT1Q13231 466 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 SLAMF1Q13291 335 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 SPRED3Q2MJR0 410 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 NHSL2Q5HYW2 709 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 TAOK1Q7L7X3 1001 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 LAS2Q8IYD9 372 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 GCNT2Q8N0V5 402 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 KRT78Q8N1N4 520 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 LIX1Q8N485 282 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 SLC15A4Q8N697 577 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 ZNF615Q8N8J6 731 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 NOA1Q8NC60 698 aaKnown RBP8.76□□□□□ -1.01
MCF2L-223ENST00000473345 FAM83FQ8NEG4 500 aaPredicted RBP8.76□□□□□ -1.01
MCF2L-223ENST00000473345 OR7G3Q8NG95 312 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 GABPB2Q8TAK5 448 aaPredicted RBP8.76□□□□□ -1.01
MCF2L-223ENST00000473345 IGFBPL1Q8WX77 278 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 DIO2Q92813 273 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 PTCD3Q96EY7 689 aaKnown RBP8.76□□□□□ -1.01
MCF2L-223ENST00000473345 VPS39Q96JC1 886 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 ZNF597Q96LX8 424 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 NODALQ96S42 347 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 TBCDQ9BTW9 1192 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 RBM24Q9BX46 236 aaKnown RBP8.76□□□□□ -1.01
MCF2L-223ENST00000473345 ANGPTL4Q9BY76 406 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 DERL2Q9GZP9 239 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 EHD1Q9H4M9 534 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 RPF2Q9H7B2 306 aaKnown RBP8.76□□□□□ -1.01
MCF2L-223ENST00000473345 COPS7BQ9H9Q2 264 aaPredicted RBP8.76□□□□□ -1.01
MCF2L-223ENST00000473345 TEX10Q9NXF1 929 aaPredicted RBP8.76□□□□□ -1.01
MCF2L-223ENST00000473345 WWOXQ9NZC7 414 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 CNIH4Q9P003 139 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 CLCF1Q9UBD9 225 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 COPS7AQ9UBW8 275 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 MTRF1LQ9UGC7 380 aaKnown RBP8.76□□□□□ -1.01
MCF2L-223ENST00000473345 CORO1CQ9ULV4 474 aaPredicted RBP8.76□□□□□ -1.01
MCF2L-223ENST00000473345 IKBKGQ9Y6K9 419 aa8.76□□□□□ -1.01
MCF2L-223ENST00000473345 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 A0A0A6YYD5 115 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 SH3D21A4FU49 640 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 PABPN1LA6NDY0 278 aaKnown RBP8.75□□□□□ -1.01
MCF2L-223ENST00000473345 FAM47E-STBD1D6RA91 191 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 NME6O75414 186 aaPredicted RBP8.75□□□□□ -1.01
MCF2L-223ENST00000473345 TNFSF13O75888 250 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 TGM6O95932 706 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 IL2RAP01589 272 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 GBAP04062 536 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 TMIGD3P0DMS9 266 aaPredicted RBP8.75□□□□□ -1.01
MCF2L-223ENST00000473345 PCNAP12004 261 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 ALOX15P16050 662 aaPredicted RBP8.75□□□□□ -1.01
MCF2L-223ENST00000473345 GSTM2P28161 218 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 BSGP35613 385 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 STARP49675 285 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 TNFRSF17Q02223 184 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 DUSP2Q05923 314 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 FAM27E3Q08E93 113 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 PDK4Q16654 411 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 GLE1Q53GS7 698 aaKnown RBP8.75□□□□□ -1.01
MCF2L-223ENST00000473345 DEPDC1Q5TB30 811 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 KHDRBS2Q5VWX1 349 aaKnown RBP8.75□□□□□ -1.01
MCF2L-223ENST00000473345 SHEQ5VZ18 495 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 FBXW10Q5XX13 1052 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 OR4C11Q6IEV9 310 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 ADAMTSL2Q86TH1 951 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 NKAPQ8N5F7 415 aaKnown RBP8.75□□□□□ -1.01
MCF2L-223ENST00000473345 PDPRQ8NCN5 879 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 CTHRC1Q96CG8 243 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 DACH2Q96NX9 599 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 WFIKKN1Q96NZ8 548 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 YIPF4Q9BSR8 244 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 PITHD1Q9GZP4 211 aaPredicted RBP8.75□□□□□ -1.01
MCF2L-223ENST00000473345 GALNT9Q9HCQ5 603 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 HEY2Q9UBP5 337 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 TRPS1Q9UHF7 1281 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 FOXD3Q9UJU5 478 aaPredicted RBP8.75□□□□□ -1.01
MCF2L-223ENST00000473345 TESMINQ9Y4I5 508 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 RAI1Q7Z5J4 1906 aaPredicted RBP8.75□□□□□ -1.01
MCF2L-223ENST00000473345 DOCK7Q96N67 2140 aa8.75□□□□□ -1.01
MCF2L-223ENST00000473345 A0A088AWK7 358 aa8.74□□□□□ -1.01
MCF2L-223ENST00000473345 SYNDIG1LA6NDD5 238 aa8.74□□□□□ -1.01
MCF2L-223ENST00000473345 A8MXE2 369 aa8.74□□□□□ -1.01
MCF2L-223ENST00000473345 CLGNO14967 610 aa8.74□□□□□ -1.01
MCF2L-223ENST00000473345 CCNT2O60583 730 aaKnown RBP8.74□□□□□ -1.01
MCF2L-223ENST00000473345 STK16O75716 305 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms