RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 KLF5Q13887 457 aaPredicted RBP2.4□□□□□ -2.03
XRN1-210ENST00000472697 AMZ1Q400G9 498 aa2.4□□□□□ -2.03
XRN1-210ENST00000472697 PDLIM3Q53GG5 364 aaPredicted RBP2.4□□□□□ -2.03
XRN1-210ENST00000472697 CTR9Q6PD62 1173 aa2.4□□□□□ -2.03
XRN1-210ENST00000472697 IQCF2Q8IXL9 164 aa2.4□□□□□ -2.03
XRN1-210ENST00000472697 SLC43A2Q8N370 569 aa2.4□□□□□ -2.03
XRN1-210ENST00000472697 POC1AQ8NBT0 407 aa2.4□□□□□ -2.03
XRN1-210ENST00000472697 CCDC197Q8NCU1 140 aa2.4□□□□□ -2.03
XRN1-210ENST00000472697 NANPQ8TBE9 248 aa2.4□□□□□ -2.03
XRN1-210ENST00000472697 PIGCQ92535 297 aa2.4□□□□□ -2.03
XRN1-210ENST00000472697 C18orf25Q96B23 403 aaPredicted RBP2.4□□□□□ -2.03
XRN1-210ENST00000472697 ZBTB18Q99592 522 aa2.4□□□□□ -2.03
XRN1-210ENST00000472697 CCT7Q99832 543 aa2.4□□□□□ -2.03
XRN1-210ENST00000472697 FAM192AQ9GZU8 254 aa2.4□□□□□ -2.03
XRN1-210ENST00000472697 OR2AG1Q9H205 316 aa2.4□□□□□ -2.03
XRN1-210ENST00000472697 SYNDIG1Q9H7V2 258 aa2.4□□□□□ -2.03
XRN1-210ENST00000472697 KAT8Q9H7Z6 458 aaKnown RBP2.4□□□□□ -2.03
XRN1-210ENST00000472697 LRRC40Q9H9A6 602 aa2.4□□□□□ -2.03
XRN1-210ENST00000472697 UBTD1Q9HAC8 227 aa2.4□□□□□ -2.03
XRN1-210ENST00000472697 TRPV5Q9NQA5 729 aa2.4□□□□□ -2.03
XRN1-210ENST00000472697 RNF146Q9NTX7 359 aa2.4□□□□□ -2.03
XRN1-210ENST00000472697 SLC38A7Q9NVC3 462 aa2.4□□□□□ -2.03
XRN1-210ENST00000472697 LHX3Q9UBR4 397 aa2.4□□□□□ -2.03
XRN1-210ENST00000472697 MRTO4Q9UKD2 239 aaKnown RBP2.4□□□□□ -2.03
XRN1-210ENST00000472697 IKZF3Q9UKT9 509 aa2.4□□□□□ -2.03
XRN1-210ENST00000472697 TCAF1Q9Y4C2 921 aa2.4□□□□□ -2.03
XRN1-210ENST00000472697 LRRIQ4A6NIV6 560 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 ARPC3O15145 178 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 MDM4O15151 490 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 RAD51DO75771 328 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 CIB2O75838 187 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 HOXB2P14652 356 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 POLR2CP19387 275 aaPredicted RBP2.39□□□□□ -2.03
XRN1-210ENST00000472697 RPL21P46778 160 aaKnown RBP2.39□□□□□ -2.03
XRN1-210ENST00000472697 TUBA4AP68366 448 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 CACNG1Q06432 222 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 GPS2Q13227 327 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 ARMCX4Q5H9R4 360 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 FAM76BQ5HYJ3 339 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 AGBL2Q5U5Z8 902 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 LRRC66Q68CR7 880 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 OR4A47Q6IF82 309 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 KIAA1161Q6NSJ0 714 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 C11orf63Q6NUN7 778 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 ZNF813Q6ZN06 617 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 C9orf139Q6ZV77 190 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 CYS1Q717R9 158 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 ASCL5Q7RTU5 278 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 EFL1Q7Z2Z2 1120 aaKnown RBP2.39□□□□□ -2.03
XRN1-210ENST00000472697 EFCAB13Q8IY85 973 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 SUMF1Q8NBK3 374 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 OR4C15Q8NGM1 316 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 OR9A1PQ8NGU1 263 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 ATP8B4Q8TF62 1192 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 PELI1Q96FA3 418 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 SENP8Q96LD8 212 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 NMNAT2Q9BZQ4 307 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 C3orf14Q9HBI5 128 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 ADGRL4Q9HBW9 690 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 PCDH9Q9HC56 1237 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 FARSBQ9NSD9 589 aaKnown RBP2.39□□□□□ -2.03
XRN1-210ENST00000472697 PACSIN2Q9UNF0 486 aaPredicted RBP2.39□□□□□ -2.03
XRN1-210ENST00000472697 COL5A3P25940 1745 aaPredicted RBP2.39□□□□□ -2.03
XRN1-210ENST00000472697 PLEKHH1Q9ULM0 1364 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 ITGB4P16144 1822 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 TTC21AQ8NDW8 1320 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 SALL1Q9NSC2 1324 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 PDE4DIPQ5VU43 2346 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 MON2Q7Z3U7 1717 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 A0A1B0GUS0 222 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 DLGAP1O14490 977 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 NARSO43776 548 aaKnown RBP2.39□□□□□ -2.03
XRN1-210ENST00000472697 SSX5O60225 188 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 FLOT1O75955 427 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 TFAP2AP05549 437 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 MMP3P08254 477 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 MMP10P09238 476 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 GSTT2P0CG29 244 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 GSTT2BP0CG30 244 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 STAG3L3P0CL85 134 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 LAP3P28838 519 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 PPP2R1BP30154 601 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 RFC2P35250 354 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 FDFT1P37268 417 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 SELENOPP49908 381 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 FOXG1P55316 489 aaPredicted RBP2.39□□□□□ -2.03
XRN1-210ENST00000472697 BACE1P56817 501 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 CBX1P83916 185 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 DMP1Q13316 513 aaPredicted RBP2.39□□□□□ -2.03
XRN1-210ENST00000472697 CEACAM7Q14002 265 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 TFDP1Q14186 410 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 RBBP5Q15291 538 aaKnown RBP2.39□□□□□ -2.03
XRN1-210ENST00000472697 ODF4Q2M2E3 257 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 DEFB115Q30KQ5 88 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 DHRS11Q6UWP2 260 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 ASB18Q6ZVZ8 466 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 Q7L0L9 218 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 LRRC70Q7Z2Q7 622 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 P4HA3Q7Z4N8 544 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 ITIH5Q86UX2 942 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms