RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 ADGRE2Q9UHX3 823 aa17.29■□□□□ 0.36
SORT1-203ENST00000471996 OR6C76A6NM76 312 aa17.28■□□□□ 0.36
SORT1-203ENST00000471996 H0Y3Z8 333 aa17.28■□□□□ 0.36
SORT1-203ENST00000471996 RTCAO00442 366 aaKnown RBP17.28■□□□□ 0.36
SORT1-203ENST00000471996 KRT14P02533 472 aa17.28■□□□□ 0.36
SORT1-203ENST00000471996 GCKP35557 465 aa17.28■□□□□ 0.36
SORT1-203ENST00000471996 SLC37A1P57057 533 aa17.28■□□□□ 0.36
SORT1-203ENST00000471996 ZNF267Q14586 743 aaPredicted RBP17.28■□□□□ 0.36
SORT1-203ENST00000471996 SPRED3Q2MJR0 410 aa17.28■□□□□ 0.36
SORT1-203ENST00000471996 TIGD3Q6B0B8 471 aa17.28■□□□□ 0.36
SORT1-203ENST00000471996 SCIMPQ6UWF3 145 aa17.28■□□□□ 0.36
SORT1-203ENST00000471996 GALNT7Q86SF2 657 aa17.28■□□□□ 0.36
SORT1-203ENST00000471996 ANKRD7Q92527 254 aa17.28■□□□□ 0.36
SORT1-203ENST00000471996 UCN3Q969E3 161 aa17.28■□□□□ 0.36
SORT1-203ENST00000471996 G6PC3Q9BUM1 346 aa17.28■□□□□ 0.36
SORT1-203ENST00000471996 TSPY26PQ9H489 355 aa17.28■□□□□ 0.36
SORT1-203ENST00000471996 GPRC5BQ9NZH0 403 aa17.28■□□□□ 0.36
SORT1-203ENST00000471996 CLCF1Q9UBD9 225 aa17.28■□□□□ 0.36
SORT1-203ENST00000471996 OARD1Q9Y530 152 aa17.28■□□□□ 0.36
SORT1-203ENST00000471996 WIF1Q9Y5W5 379 aa17.28■□□□□ 0.36
SORT1-203ENST00000471996 A0A1W2PNV4 684 aa17.27■□□□□ 0.36
SORT1-203ENST00000471996 NPEPPSL1A6NEC2 478 aa17.27■□□□□ 0.36
SORT1-203ENST00000471996 GNB5O14775 395 aa17.27■□□□□ 0.36
SORT1-203ENST00000471996 PRAMEF4O60810 478 aa17.27■□□□□ 0.36
SORT1-203ENST00000471996 SCELO95171 688 aa17.27■□□□□ 0.36
SORT1-203ENST00000471996 ALOX15P16050 662 aaPredicted RBP17.27■□□□□ 0.36
SORT1-203ENST00000471996 PGAM1P18669 254 aa17.27■□□□□ 0.36
SORT1-203ENST00000471996 HIST1H1TP22492 207 aaPredicted RBP17.27■□□□□ 0.36
SORT1-203ENST00000471996 CHMP24386 653 aa17.27■□□□□ 0.36
SORT1-203ENST00000471996 CD79BP40259 229 aa17.27■□□□□ 0.36
SORT1-203ENST00000471996 NR1H2P55055 460 aa17.27■□□□□ 0.36
SORT1-203ENST00000471996 SRYQ05066 204 aa17.27■□□□□ 0.36
SORT1-203ENST00000471996 PRAMEF9Q5VWM5 478 aa17.27■□□□□ 0.36
SORT1-203ENST00000471996 FAM45BPQ6NSW5 357 aa17.27■□□□□ 0.36
SORT1-203ENST00000471996 ST13P4Q8IZP2 240 aaPredicted RBP17.27■□□□□ 0.36
SORT1-203ENST00000471996 MAPK1IP1LQ8NDC0 245 aa17.27■□□□□ 0.36
SORT1-203ENST00000471996 FAM45AQ8TCE6 357 aa17.27■□□□□ 0.36
SORT1-203ENST00000471996 TMEM171Q8WVE6 324 aa17.27■□□□□ 0.36
SORT1-203ENST00000471996 TP53INP1Q96A56 240 aa17.27■□□□□ 0.36
SORT1-203ENST00000471996 RHBDF1Q96CC6 855 aa17.27■□□□□ 0.36
SORT1-203ENST00000471996 CXorf56Q9H5V9 222 aa17.27■□□□□ 0.36
SORT1-203ENST00000471996 RPF2Q9H7B2 306 aaKnown RBP17.27■□□□□ 0.36
SORT1-203ENST00000471996 SNX15Q9NRS6 342 aa17.27■□□□□ 0.36
SORT1-203ENST00000471996 C2orf92A0A1B0GVN3 265 aa17.26■□□□□ 0.35
SORT1-203ENST00000471996 RNF223E7ERA6 249 aa17.26■□□□□ 0.35
SORT1-203ENST00000471996 TMCC2O75069 709 aa17.26■□□□□ 0.35
SORT1-203ENST00000471996 CLPSP04118 112 aa17.26■□□□□ 0.35
SORT1-203ENST00000471996 ZNF37AP17032 561 aaPredicted RBP17.26■□□□□ 0.35
SORT1-203ENST00000471996 TMED10P49755 219 aaKnown RBP17.26■□□□□ 0.35
SORT1-203ENST00000471996 ATP5J2P56134 94 aa17.26■□□□□ 0.35
SORT1-203ENST00000471996 RPP38P78345 283 aaKnown RBP17.26■□□□□ 0.35
SORT1-203ENST00000471996 PCDH1Q08174 1060 aa17.26■□□□□ 0.35
SORT1-203ENST00000471996 AP5B1Q2VPB7 878 aa17.26■□□□□ 0.35
SORT1-203ENST00000471996 ENPP6Q6UWR7 440 aa17.26■□□□□ 0.35
SORT1-203ENST00000471996 OR1J4Q8NGS1 313 aa17.26■□□□□ 0.35
SORT1-203ENST00000471996 TANKQ92844 425 aa17.26■□□□□ 0.35
SORT1-203ENST00000471996 STARD4Q96DR4 205 aa17.26■□□□□ 0.35
SORT1-203ENST00000471996 FAM111AQ96PZ2 611 aa17.26■□□□□ 0.35
SORT1-203ENST00000471996 BAG1Q99933 345 aaPredicted RBP17.26■□□□□ 0.35
SORT1-203ENST00000471996 MS4A8Q9BY19 250 aa17.26■□□□□ 0.35
SORT1-203ENST00000471996 WWOXQ9NZC7 414 aa17.26■□□□□ 0.35
SORT1-203ENST00000471996 SLC17A6Q9P2U8 582 aa17.26■□□□□ 0.35
SORT1-203ENST00000471996 CORO1CQ9ULV4 474 aaPredicted RBP17.26■□□□□ 0.35
SORT1-203ENST00000471996 DSCAMO60469 2012 aa17.26■□□□□ 0.35
SORT1-203ENST00000471996 A0A087X1B8 175 aa17.25■□□□□ 0.35
SORT1-203ENST00000471996 PHF1O43189 567 aaPredicted RBP17.25■□□□□ 0.35
SORT1-203ENST00000471996 TLX2O43763 284 aaPredicted RBP17.25■□□□□ 0.35
SORT1-203ENST00000471996 CDH16O75309 829 aa17.25■□□□□ 0.35
SORT1-203ENST00000471996 SMNDC1O75940 238 aaKnown RBP eCLIP17.25■□□□□ 0.35
SORT1-203ENST00000471996 TP53P04637 393 aaPredicted RBP17.25■□□□□ 0.35
SORT1-203ENST00000471996 CCKARP32238 428 aa17.25■□□□□ 0.35
SORT1-203ENST00000471996 UGT2B10P36537 528 aa17.25■□□□□ 0.35
SORT1-203ENST00000471996 ZNF474Q6S9Z5 364 aaPredicted RBP17.25■□□□□ 0.35
SORT1-203ENST00000471996 RIT1Q92963 219 aa17.25■□□□□ 0.35
SORT1-203ENST00000471996 CTHRC1Q96CG8 243 aa17.25■□□□□ 0.35
SORT1-203ENST00000471996 WDR34Q96EX3 536 aa17.25■□□□□ 0.35
SORT1-203ENST00000471996 PTCD3Q96EY7 689 aaKnown RBP17.25■□□□□ 0.35
SORT1-203ENST00000471996 VPS39Q96JC1 886 aa17.25■□□□□ 0.35
SORT1-203ENST00000471996 KRT12Q99456 494 aa17.25■□□□□ 0.35
SORT1-203ENST00000471996 PELOQ9BRX2 385 aaKnown RBP17.25■□□□□ 0.35
SORT1-203ENST00000471996 MS4A12Q9NXJ0 267 aa17.25■□□□□ 0.35
SORT1-203ENST00000471996 RAI1Q7Z5J4 1906 aaPredicted RBP17.25■□□□□ 0.35
SORT1-203ENST00000471996 CLGNO14967 610 aa17.24■□□□□ 0.35
SORT1-203ENST00000471996 OR10H2O60403 315 aa17.24■□□□□ 0.35
SORT1-203ENST00000471996 TTC4O95801 387 aa17.24■□□□□ 0.35
SORT1-203ENST00000471996 CRHP06850 196 aa17.24■□□□□ 0.35
SORT1-203ENST00000471996 CD22P20273 847 aa17.24■□□□□ 0.35
SORT1-203ENST00000471996 SSR2P43308 183 aa17.24■□□□□ 0.35
SORT1-203ENST00000471996 SLAMF1Q13291 335 aa17.24■□□□□ 0.35
SORT1-203ENST00000471996 DOC2AQ14183 400 aa17.24■□□□□ 0.35
SORT1-203ENST00000471996 SETDB1Q15047 1291 aa17.24■□□□□ 0.35
SORT1-203ENST00000471996 TMEM35AQ53FP2 167 aa17.24■□□□□ 0.35
SORT1-203ENST00000471996 C10orf62Q5T681 223 aaPredicted RBP17.24■□□□□ 0.35
SORT1-203ENST00000471996 TEDDM1Q5T9Z0 273 aa17.24■□□□□ 0.35
SORT1-203ENST00000471996 ANGPTL8Q6UXH0 198 aa17.24■□□□□ 0.35
SORT1-203ENST00000471996 FRA10AC1Q70Z53 315 aa17.24■□□□□ 0.35
SORT1-203ENST00000471996 ZNF550Q7Z398 422 aa17.24■□□□□ 0.35
SORT1-203ENST00000471996 GRAMD2AQ8IUY3 354 aa17.24■□□□□ 0.35
SORT1-203ENST00000471996 TMEM139Q8IV31 216 aa17.24■□□□□ 0.35
SORT1-203ENST00000471996 TRIM42Q8IWZ5 723 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms