RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 RNF123Q5XPI4 1314 aa5.75□□□□□ -1.49
SMC5-202ENST00000471372 BUB1O43683 1085 aa5.75□□□□□ -1.49
SMC5-202ENST00000471372 NUDT21O43809 227 aaKnown RBP5.75□□□□□ -1.49
SMC5-202ENST00000471372 TM7SF2O76062 418 aa5.75□□□□□ -1.49
SMC5-202ENST00000471372 IGKV2-30P06310 120 aa5.75□□□□□ -1.49
SMC5-202ENST00000471372 FCER2P06734 321 aa5.75□□□□□ -1.49
SMC5-202ENST00000471372 CYLC1P35663 651 aaPredicted RBP5.75□□□□□ -1.49
SMC5-202ENST00000471372 TDO2P48775 406 aa5.75□□□□□ -1.49
SMC5-202ENST00000471372 ACADVLP49748 655 aa5.75□□□□□ -1.49
SMC5-202ENST00000471372 RGS4P49798 205 aa5.75□□□□□ -1.49
SMC5-202ENST00000471372 TAB1Q15750 504 aa5.75□□□□□ -1.49
SMC5-202ENST00000471372 POM121L1PQ3SYA9 428 aa5.75□□□□□ -1.49
SMC5-202ENST00000471372 TCHHL1Q5QJ38 904 aaPredicted RBP5.75□□□□□ -1.49
SMC5-202ENST00000471372 NEPROQ6NW34 567 aa5.75□□□□□ -1.49
SMC5-202ENST00000471372 PMF1Q6P1K2 205 aa5.75□□□□□ -1.49
SMC5-202ENST00000471372 SPSB3Q6PJ21 355 aa5.75□□□□□ -1.49
SMC5-202ENST00000471372 PTAR1Q7Z6K3 402 aaPredicted RBP5.75□□□□□ -1.49
SMC5-202ENST00000471372 OR5AP2Q8NGF4 316 aa5.75□□□□□ -1.49
SMC5-202ENST00000471372 OR4D10Q8NGI6 311 aa5.75□□□□□ -1.49
SMC5-202ENST00000471372 HPDLQ96IR7 371 aa5.75□□□□□ -1.49
SMC5-202ENST00000471372 PRAC1Q96KF2 57 aa5.75□□□□□ -1.49
SMC5-202ENST00000471372 CASD1Q96PB1 797 aa5.75□□□□□ -1.49
SMC5-202ENST00000471372 LRRC40Q9H9A6 602 aa5.75□□□□□ -1.49
SMC5-202ENST00000471372 ZNF71Q9NQZ8 489 aaPredicted RBP5.75□□□□□ -1.49
SMC5-202ENST00000471372 STARD5Q9NSY2 213 aa5.75□□□□□ -1.49
SMC5-202ENST00000471372 RAI14Q9P0K7 980 aa5.75□□□□□ -1.49
SMC5-202ENST00000471372 WIPI2Q9Y4P8 454 aa5.75□□□□□ -1.49
SMC5-202ENST00000471372 DDX49Q9Y6V7 483 aaKnown RBP5.75□□□□□ -1.49
SMC5-202ENST00000471372 OR5H15A6NDH6 313 aa5.74□□□□□ -1.49
SMC5-202ENST00000471372 MEI4A8MW99 385 aa5.74□□□□□ -1.49
SMC5-202ENST00000471372 SMIM1B2RUZ4 78 aa5.74□□□□□ -1.49
SMC5-202ENST00000471372 H0YL77 283 aa5.74□□□□□ -1.49
SMC5-202ENST00000471372 SURF4O15260 269 aa5.74□□□□□ -1.49
SMC5-202ENST00000471372 SURF6O75683 361 aaKnown RBP5.74□□□□□ -1.49
SMC5-202ENST00000471372 RHOBTB1O94844 696 aa5.74□□□□□ -1.49
SMC5-202ENST00000471372 CHRNA1P02708 482 aa5.74□□□□□ -1.49
SMC5-202ENST00000471372 RPLP0P05388 317 aaKnown RBP5.74□□□□□ -1.49
SMC5-202ENST00000471372 NDST1P52848 882 aa5.74□□□□□ -1.49
SMC5-202ENST00000471372 PPIAP62937 165 aaKnown RBP5.74□□□□□ -1.49
SMC5-202ENST00000471372 CDKL1Q00532 357 aa5.74□□□□□ -1.49
SMC5-202ENST00000471372 ARL16Q0P5N6 197 aa5.74□□□□□ -1.49
SMC5-202ENST00000471372 PARP6Q2NL67 630 aa5.74□□□□□ -1.49
SMC5-202ENST00000471372 HKDC1Q2TB90 917 aa5.74□□□□□ -1.49
SMC5-202ENST00000471372 RFTN2Q52LD8 501 aaPredicted RBP5.74□□□□□ -1.49
SMC5-202ENST00000471372 C1orf189Q5VU69 101 aa5.74□□□□□ -1.49
SMC5-202ENST00000471372 GDPD4Q6W3E5 623 aa5.74□□□□□ -1.49
SMC5-202ENST00000471372 OR4N5Q8IXE1 308 aa5.74□□□□□ -1.49
SMC5-202ENST00000471372 DDHD1Q8NEL9 900 aa5.74□□□□□ -1.49
SMC5-202ENST00000471372 OR5M9Q8NGP3 310 aa5.74□□□□□ -1.49
SMC5-202ENST00000471372 TUBGCP3Q96CW5 907 aa5.74□□□□□ -1.49
SMC5-202ENST00000471372 SECISBP2Q96T21 854 aaKnown RBP5.74□□□□□ -1.49
SMC5-202ENST00000471372 ANP32EQ9BTT0 268 aa5.74□□□□□ -1.49
SMC5-202ENST00000471372 RPAP3Q9H6T3 665 aaPredicted RBP5.74□□□□□ -1.49
SMC5-202ENST00000471372 NAALAD2Q9Y3Q0 740 aa5.74□□□□□ -1.49
SMC5-202ENST00000471372 LOC390937A0A1W2PQ73 354 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 ZSCAN5BA6NJL1 495 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 CCDC169A6NNP5 214 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 NPIPA2E9PIF3 369 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 BUB3O43684 328 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 KHDRBS3O75525 346 aaKnown RBP5.73□□□□□ -1.49
SMC5-202ENST00000471372 NXPH2O95156 264 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 CSF2P04141 144 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 CD48P09326 243 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 ERVK-10P10266 1014 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 ID1P41134 155 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 HTR5AP47898 357 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 RAG2P55895 527 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 HERVK_113P63132 956 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 ERVK-8P63133 956 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 POU3F1Q03052 451 aaPredicted RBP5.73□□□□□ -1.49
SMC5-202ENST00000471372 SRYQ05066 204 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 RIGQ13278 110 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 ITPK1Q13572 414 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 DCAF4L1Q3SXM0 396 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 ACCSLQ4AC99 568 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 BLOC1S2Q6QNY1 142 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 C19orf48Q6RUI8 117 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 LRRC70Q7Z2Q7 622 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 RPAINQ86UA6 219 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 EFCAB13Q8IY85 973 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 CCDC36Q8IYA8 594 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 DCLK2Q8N568 766 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 NFAM1Q8NET5 270 aaPredicted RBP5.73□□□□□ -1.49
SMC5-202ENST00000471372 PNPT1Q8TCS8 783 aaKnown RBP5.73□□□□□ -1.49
SMC5-202ENST00000471372 CCT7Q99832 543 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 TBCDQ9BTW9 1192 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 ERVK-6Q9BXR3 956 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 GON7Q9BXV9 100 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 GSDMCQ9BYG8 508 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 PITPNM3Q9BZ71 974 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 DCTPP1Q9H773 170 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 TRPV5Q9NQA5 729 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 RABL2AQ9UBK7 228 aaPredicted RBP5.73□□□□□ -1.49
SMC5-202ENST00000471372 ERRFI1Q9UJM3 462 aaPredicted RBP5.73□□□□□ -1.49
SMC5-202ENST00000471372 FZR1Q9UM11 496 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 CLEC4AQ9UMR7 237 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 MRPS33Q9Y291 106 aaKnown RBP5.73□□□□□ -1.49
SMC5-202ENST00000471372 FKBP7Q9Y680 259 aa5.73□□□□□ -1.49
SMC5-202ENST00000471372 GSAPA4D1B5 854 aa5.72□□□□□ -1.49
SMC5-202ENST00000471372 WASH3PC4AMC7 463 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms