RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, human

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSB-209	ENST00000470621	ACER2	Q5QJU3	275 aa		4.02	□□□□□ -1.77
SSB-209	ENST00000470621	C1orf189	Q5VU69	101 aa		4.02	□□□□□ -1.77
SSB-209	ENST00000470621	ABRAXAS1	Q6UWZ7	409 aa		4.02	□□□□□ -1.77
SSB-209	ENST00000470621	SERPINA12	Q8IW75	414 aa		4.02	□□□□□ -1.77
SSB-209	ENST00000470621	FBXW8	Q8N3Y1	598 aa		4.02	□□□□□ -1.77
SSB-209	ENST00000470621	LPCAT1	Q8NF37	534 aa		4.02	□□□□□ -1.77
SSB-209	ENST00000470621	RBM18	Q96H35	190 aa	Known RBP	4.02	□□□□□ -1.77
SSB-209	ENST00000470621	CAPNS2	Q96L46	248 aa		4.02	□□□□□ -1.77
SSB-209	ENST00000470621	TSPYL1	Q9H0U9	437 aa		4.02	□□□□□ -1.77
SSB-209	ENST00000470621		Q9HAA7	133 aa		4.02	□□□□□ -1.77
SSB-209	ENST00000470621	AMBN	Q9NP70	447 aa		4.02	□□□□□ -1.77
SSB-209	ENST00000470621	ABCC13	Q9NSE7	274 aa		4.02	□□□□□ -1.77
SSB-209	ENST00000470621	LRRD1	A4D1F6	860 aa		4.01	□□□□□ -1.77
SSB-209	ENST00000470621	YJEFN3	A6XGL0	299 aa		4.01	□□□□□ -1.77
SSB-209	ENST00000470621	TSPAN2	O60636	221 aa		4.01	□□□□□ -1.77
SSB-209	ENST00000470621	REC8	O95072	547 aa		4.01	□□□□□ -1.77
SSB-209	ENST00000470621	DUX4L4	P0CJ87	422 aa		4.01	□□□□□ -1.77
SSB-209	ENST00000470621	P4HA1	P13674	534 aa		4.01	□□□□□ -1.77
SSB-209	ENST00000470621	UGT1A6	P19224	532 aa		4.01	□□□□□ -1.77
SSB-209	ENST00000470621	FAS	P25445	335 aa		4.01	□□□□□ -1.77
SSB-209	ENST00000470621	UCP1	P25874	307 aa		4.01	□□□□□ -1.77
SSB-209	ENST00000470621	CALML3	P27482	149 aa		4.01	□□□□□ -1.77
SSB-209	ENST00000470621	UCP2	P55851	309 aa		4.01	□□□□□ -1.77
SSB-209	ENST00000470621	RPS4X	P62701	263 aa	Known RBP	4.01	□□□□□ -1.77
SSB-209	ENST00000470621	TRA2B	P62995	288 aa	Known RBP	4.01	□□□□□ -1.77
SSB-209	ENST00000470621	NDP	Q00604	133 aa		4.01	□□□□□ -1.77
SSB-209	ENST00000470621	KLF5	Q13887	457 aa	Predicted RBP	4.01	□□□□□ -1.77
SSB-209	ENST00000470621	CCDC184	Q52MB2	194 aa		4.01	□□□□□ -1.77
SSB-209	ENST00000470621	MPPE1	Q53F39	396 aa		4.01	□□□□□ -1.77
SSB-209	ENST00000470621	RTL6	Q6ICC9	239 aa		4.01	□□□□□ -1.77
SSB-209	ENST00000470621	IYD	Q6PHW0	289 aa		4.01	□□□□□ -1.77
SSB-209	ENST00000470621	TMCO5A	Q8N6Q1	288 aa		4.01	□□□□□ -1.77
SSB-209	ENST00000470621	BEST4	Q8NFU0	473 aa		4.01	□□□□□ -1.77
SSB-209	ENST00000470621	FBXO25	Q8TCJ0	367 aa		4.01	□□□□□ -1.77
SSB-209	ENST00000470621	TBCK	Q8TEA7	893 aa		4.01	□□□□□ -1.77
SSB-209	ENST00000470621	ZBED6CL	Q96FA7	236 aa	Predicted RBP	4.01	□□□□□ -1.77
SSB-209	ENST00000470621	MRPL9	Q9BYD2	267 aa	Known RBP	4.01	□□□□□ -1.77
SSB-209	ENST00000470621	DNAJC11	Q9NVH1	559 aa		4.01	□□□□□ -1.77
SSB-209	ENST00000470621	B4GALT7	Q9UBV7	327 aa		4.01	□□□□□ -1.77
SSB-209	ENST00000470621	SEC14L4	Q9UDX3	406 aa		4.01	□□□□□ -1.77
SSB-209	ENST00000470621		Q9UF83	564 aa		4.01	□□□□□ -1.77
SSB-209	ENST00000470621		A0A1W2PRV1	198 aa		4	□□□□□ -1.77
SSB-209	ENST00000470621	CCT8L1P	A6NM43	557 aa		4	□□□□□ -1.77
SSB-209	ENST00000470621	OAS1	P00973	400 aa	Known RBP	4	□□□□□ -1.77
SSB-209	ENST00000470621	PDGFB	P01127	241 aa	Predicted RBP	4	□□□□□ -1.77
SSB-209	ENST00000470621	FCER2	P06734	321 aa		4	□□□□□ -1.77
SSB-209	ENST00000470621	MBL2	P11226	248 aa	Predicted RBP	4	□□□□□ -1.77
SSB-209	ENST00000470621	PPP2R1B	P30154	601 aa		4	□□□□□ -1.77
SSB-209	ENST00000470621	RPL34	P49207	117 aa	Known RBP	4	□□□□□ -1.77
SSB-209	ENST00000470621	EXOSC7	Q15024	291 aa	Known RBP	4	□□□□□ -1.77
SSB-209	ENST00000470621	TRADD	Q15628	312 aa		4	□□□□□ -1.77
SSB-209	ENST00000470621	CNPY1	Q3B7I2	92 aa		4	□□□□□ -1.77
SSB-209	ENST00000470621	PRR30	Q53SZ7	412 aa	Predicted RBP	4	□□□□□ -1.77
SSB-209	ENST00000470621	UTF1	Q5T230	341 aa		4	□□□□□ -1.77
SSB-209	ENST00000470621	C1QTNF12	Q5T7M4	302 aa		4	□□□□□ -1.77
SSB-209	ENST00000470621	SEL1L2	Q5TEA6	688 aa		4	□□□□□ -1.77
SSB-209	ENST00000470621	CGB2	Q6NT52	195 aa		4	□□□□□ -1.77
SSB-209	ENST00000470621	CDC42EP5	Q6NZY7	148 aa		4	□□□□□ -1.77
SSB-209	ENST00000470621	PAMR1	Q6UXH9	720 aa		4	□□□□□ -1.77
SSB-209	ENST00000470621	PRSS48	Q7RTY5	328 aa		4	□□□□□ -1.77
SSB-209	ENST00000470621	ST7L	Q8TDW4	575 aa		4	□□□□□ -1.77
SSB-209	ENST00000470621	BIRC7	Q96CA5	298 aa		4	□□□□□ -1.77
SSB-209	ENST00000470621	PPP1R16A	Q96I34	528 aa		4	□□□□□ -1.77
SSB-209	ENST00000470621	SERAC1	Q96JX3	654 aa		4	□□□□□ -1.77
SSB-209	ENST00000470621	GAN	Q9H2C0	597 aa		4	□□□□□ -1.77
SSB-209	ENST00000470621	ELL3	Q9HB65	397 aa	Predicted RBP	4	□□□□□ -1.77
SSB-209	ENST00000470621	ZCCHC3	Q9NUD5	404 aa	Known RBP	4	□□□□□ -1.77
SSB-209	ENST00000470621	MAD2L2	Q9UI95	211 aa		4	□□□□□ -1.77
SSB-209	ENST00000470621	IKZF3	Q9UKT9	509 aa		4	□□□□□ -1.77
SSB-209	ENST00000470621	IGHV3OR16-12	A0A075B7B8	117 aa		3.99	□□□□□ -1.77
SSB-209	ENST00000470621	SLC28A1	O00337	649 aa		3.99	□□□□□ -1.77
SSB-209	ENST00000470621	SH2D1B	O14796	132 aa		3.99	□□□□□ -1.77
SSB-209	ENST00000470621	STIP1	P31948	543 aa	Known RBP	3.99	□□□□□ -1.77
SSB-209	ENST00000470621	MFAP2	P55001	183 aa		3.99	□□□□□ -1.77
SSB-209	ENST00000470621	MARC1	Q5VT66	337 aa		3.99	□□□□□ -1.77
SSB-209	ENST00000470621	RHBDD2	Q6NTF9	364 aa		3.99	□□□□□ -1.77
SSB-209	ENST00000470621	ADAMTSL5	Q6ZMM2	481 aa		3.99	□□□□□ -1.77
SSB-209	ENST00000470621	MOB2	Q70IA6	237 aa		3.99	□□□□□ -1.77
SSB-209	ENST00000470621	GPR142	Q7Z601	462 aa		3.99	□□□□□ -1.77
SSB-209	ENST00000470621	IQCA1	Q86XH1	822 aa		3.99	□□□□□ -1.77
SSB-209	ENST00000470621	LINC00518	Q8N0U6	118 aa		3.99	□□□□□ -1.77
SSB-209	ENST00000470621	C5orf30	Q96GV9	206 aa		3.99	□□□□□ -1.77
SSB-209	ENST00000470621	CNOT6L	Q96LI5	555 aa	Known RBP	3.99	□□□□□ -1.77
SSB-209	ENST00000470621	RNF41	Q9H4P4	317 aa	Predicted RBP	3.99	□□□□□ -1.77
SSB-209	ENST00000470621	ACOXL	Q9NUZ1	547 aa		3.99	□□□□□ -1.77
SSB-209	ENST00000470621	KIF25-AS1	Q9Y6Z4	181 aa		3.99	□□□□□ -1.77
SSB-209	ENST00000470621	CFAP65	Q6ZU64	1925 aa	Known RBP	3.99	□□□□□ -1.77
SSB-209	ENST00000470621	IGHV3-9	P01782	118 aa		3.98	□□□□□ -1.77
SSB-209	ENST00000470621	KRTAP12-2	P59991	146 aa		3.98	□□□□□ -1.77
SSB-209	ENST00000470621	PPIA	P62937	165 aa	Known RBP	3.98	□□□□□ -1.77
SSB-209	ENST00000470621	TCHHL1	Q5QJ38	904 aa	Predicted RBP	3.98	□□□□□ -1.77
SSB-209	ENST00000470621	B3GLCT	Q6Y288	498 aa		3.98	□□□□□ -1.77
SSB-209	ENST00000470621	CRYGN	Q8WXF5	182 aa		3.98	□□□□□ -1.77
SSB-209	ENST00000470621	CFAP36	Q96G28	342 aa		3.98	□□□□□ -1.77
SSB-209	ENST00000470621	PIWIL1	Q96J94	861 aa	Known RBP	3.98	□□□□□ -1.77
SSB-209	ENST00000470621	RPGRIP1	Q96KN7	1286 aa		3.98	□□□□□ -1.77
SSB-209	ENST00000470621	SPAG8	Q99932	426 aa	Predicted RBP	3.98	□□□□□ -1.77
SSB-209	ENST00000470621	NARF	Q9UHQ1	456 aa		3.98	□□□□□ -1.77
SSB-209	ENST00000470621	ATG4B	Q9Y4P1	393 aa		3.98	□□□□□ -1.77
SSB-209	ENST00000470621		A0A0A6YYD4	124 aa		3.97	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms