RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 DUSP6Q16828 381 aa8.94□□□□□ -0.98
TOP3A-203ENST00000469739 IQCCQ4KMZ1 466 aa8.94□□□□□ -0.98
TOP3A-203ENST00000469739 CEP78Q5JTW2 689 aa8.94□□□□□ -0.98
TOP3A-203ENST00000469739 TPRG1LQ5T0D9 272 aa8.94□□□□□ -0.98
TOP3A-203ENST00000469739 NDUFAF5Q5TEU4 345 aa8.94□□□□□ -0.98
TOP3A-203ENST00000469739 GTF2IRD2BQ6EKJ0 949 aa8.94□□□□□ -0.98
TOP3A-203ENST00000469739 UNC5DQ6UXZ4 953 aa8.94□□□□□ -0.98
TOP3A-203ENST00000469739 SLCO6A1Q86UG4 719 aa8.94□□□□□ -0.98
TOP3A-203ENST00000469739 GTF2IRD2Q86UP8 949 aa8.94□□□□□ -0.98
TOP3A-203ENST00000469739 KCT2Q8NC54 265 aa8.94□□□□□ -0.98
TOP3A-203ENST00000469739 SIMC1Q8NDZ2 872 aa8.94□□□□□ -0.98
TOP3A-203ENST00000469739 OR52N2Q8NGI0 321 aa8.94□□□□□ -0.98
TOP3A-203ENST00000469739 OR52E1Q8NGJ3 308 aa8.94□□□□□ -0.98
TOP3A-203ENST00000469739 FAR1Q8WVX9 515 aa8.94□□□□□ -0.98
TOP3A-203ENST00000469739 KAT2AQ92830 837 aa8.94□□□□□ -0.98
TOP3A-203ENST00000469739 TP53INP1Q96A56 240 aa8.94□□□□□ -0.98
TOP3A-203ENST00000469739 C16orf58Q96GQ5 468 aa8.94□□□□□ -0.98
TOP3A-203ENST00000469739 SLC17A9Q9BYT1 436 aa8.94□□□□□ -0.98
TOP3A-203ENST00000469739 CHST8Q9H2A9 424 aa8.94□□□□□ -0.98
TOP3A-203ENST00000469739 CPNE5Q9HCH3 593 aa8.94□□□□□ -0.98
TOP3A-203ENST00000469739 LHX9Q9NQ69 397 aa8.94□□□□□ -0.98
TOP3A-203ENST00000469739 ZCCHC3Q9NUD5 404 aaKnown RBP8.94□□□□□ -0.98
TOP3A-203ENST00000469739 IMPAD1Q9NX62 359 aa8.94□□□□□ -0.98
TOP3A-203ENST00000469739 ENPP5Q9UJA9 477 aa8.94□□□□□ -0.98
TOP3A-203ENST00000469739 GPR34Q9UPC5 381 aa8.94□□□□□ -0.98
TOP3A-203ENST00000469739 RNF6Q9Y252 685 aa8.94□□□□□ -0.98
TOP3A-203ENST00000469739 ASCC3Q8N3C0 2202 aaKnown RBP8.93□□□□□ -0.98
TOP3A-203ENST00000469739 CELSR3Q9NYQ7 3312 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 A0A1W2PPV9 198 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 ZNF99A8MXY4 864 aaPredicted RBP8.93□□□□□ -0.98
TOP3A-203ENST00000469739 ANHXE9PGG2 379 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 C5orf67F2Z3F1 127 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 CCRL2O00421 344 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 BTN3A3O00478 584 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 WBP4O75554 376 aaKnown RBP8.93□□□□□ -0.98
TOP3A-203ENST00000469739 GADD45GO95257 159 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 STSP08842 583 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 COL9A1P20849 921 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 CERS1P27544 350 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 CTSKP43235 329 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 NCBP2P52298 156 aaKnown RBP eCLIP8.93□□□□□ -0.98
TOP3A-203ENST00000469739 CSNK1G2P78368 415 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 VEZF1Q14119 521 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 LRRC32Q14392 662 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 TMEM52BQ4KMG9 183 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 ZNF793Q6ZN11 406 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 LACC1Q8IV20 430 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 PHOSPHO2Q8TCD6 241 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 SMPDL3AQ92484 453 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 CAMK1GQ96NX5 476 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 ZNF300Q96RE9 604 aaPredicted RBP8.93□□□□□ -0.98
TOP3A-203ENST00000469739 BBS4Q96RK4 519 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 ZNF717Q9BY31 904 aaPredicted RBP8.93□□□□□ -0.98
TOP3A-203ENST00000469739 OR2B2Q9GZK3 357 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 NFKBIL1Q9UBC1 381 aaPredicted RBP8.93□□□□□ -0.98
TOP3A-203ENST00000469739 ATP6V1HQ9UI12 483 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 AP3M1Q9Y2T2 418 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 RWDD3Q9Y3V2 267 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 PCDHGA6Q9Y5G7 932 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 MUC22E2RYF6 1773 aaPredicted RBP8.93□□□□□ -0.98
TOP3A-203ENST00000469739 CACNA1CQ13936 2221 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 NPIPB8E9PQR5 432 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 M0R3G1 203 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 FOXE1O00358 373 aaPredicted RBP8.93□□□□□ -0.98
TOP3A-203ENST00000469739 HAT1O14929 419 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 RGS10O43665 173 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 OR10H3O60404 316 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 RNGTTO60942 597 aaKnown RBP8.93□□□□□ -0.98
TOP3A-203ENST00000469739 UGT2B11O75310 529 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 GASTP01350 101 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 DNTTP04053 509 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 KRT8P05787 483 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 NR2F1P10589 423 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 TNNI3P19429 210 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 GSTM2P28161 218 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 ACSL1P33121 698 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 PCGF2P35227 344 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 BSGP35613 385 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 BCL6P41182 706 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 BUD31P41223 144 aaPredicted RBP8.93□□□□□ -0.98
TOP3A-203ENST00000469739 CCT3P49368 545 aaKnown RBP8.93□□□□□ -0.98
TOP3A-203ENST00000469739 LIM2P55344 173 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 DUSP2Q05923 314 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 CDC20Q12834 499 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 SLC13A2Q13183 592 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 PUM1Q14671 1186 aaKnown RBP eCLIP8.93□□□□□ -0.98
TOP3A-203ENST00000469739 TMEM196Q5HYL7 178 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 RSBN1Q5VWQ0 802 aaPredicted RBP8.93□□□□□ -0.98
TOP3A-203ENST00000469739 ANKRD54Q6NXT1 300 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 IQCF1Q8N6M8 205 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 ASCC1Q8N9N2 400 aaKnown RBP8.93□□□□□ -0.98
TOP3A-203ENST00000469739 COX14Q96I36 57 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 COPS4Q9BT78 406 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 MS4A8Q9BY19 250 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 AICDAQ9GZX7 198 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 C6orf106Q9H6K1 298 aaPredicted RBP8.93□□□□□ -0.98
TOP3A-203ENST00000469739 PHPT1Q9NRX4 125 aaPredicted RBP8.93□□□□□ -0.98
TOP3A-203ENST00000469739 DUSP12Q9UNI6 340 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 ATG4BQ9Y4P1 393 aa8.93□□□□□ -0.98
TOP3A-203ENST00000469739 COL4A3Q01955 1670 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms