RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 CCDC188H7C350 402 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 GNB5O14775 395 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 DYRK3O43781 588 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 AIFM1O95831 613 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 LTA4HP09960 611 aaKnown RBP11.23□□□□□ -0.61
HDAC3-204ENST00000469207 FAM58BPP0C7Q3 252 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 DNASE1P24855 282 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 TACR1P25103 407 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 TLX1P31314 330 aaPredicted RBP11.23□□□□□ -0.61
HDAC3-204ENST00000469207 SPRP35270 261 aaPredicted RBP11.23□□□□□ -0.61
HDAC3-204ENST00000469207 SOX18P35713 384 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 DGKQP52824 942 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 PPP2R2AP63151 447 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 PCDH1Q08174 1060 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 CPSF6Q16630 551 aaKnown RBP eCLIP11.23□□□□□ -0.61
HDAC3-204ENST00000469207 PFKFB4Q16877 469 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 SPRED3Q2MJR0 410 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 ACSF3Q4G176 576 aaPredicted RBP11.23□□□□□ -0.61
HDAC3-204ENST00000469207 WIPI1Q5MNZ9 446 aaPredicted RBP11.23□□□□□ -0.61
HDAC3-204ENST00000469207 CENPLQ8N0S6 344 aaPredicted RBP11.23□□□□□ -0.61
HDAC3-204ENST00000469207 ZNF441Q8N8Z8 693 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 SIMC1Q8NDZ2 872 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 GOT1L1Q8NHS2 421 aaPredicted RBP11.23□□□□□ -0.61
HDAC3-204ENST00000469207 RMND5BQ96G75 393 aaPredicted RBP11.23□□□□□ -0.61
HDAC3-204ENST00000469207 ART5Q96L15 291 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 RILPQ96NA2 401 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 CDK15Q96Q40 435 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 ERP44Q9BS26 406 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 TEX10Q9NXF1 929 aaPredicted RBP11.23□□□□□ -0.61
HDAC3-204ENST00000469207 B4GALT7Q9UBV7 327 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 PHF11Q9UIL8 331 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 CAMK2AQ9UQM7 478 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 NPFFR2Q9Y5X5 522 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 MED12Q93074 2177 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 NAV3Q8IVL0 2385 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 AHRRA9YTQ3 701 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 DVL2O14641 736 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 RAD51CO43502 376 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 KERAO60938 352 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 SIX3O95343 332 aaPredicted RBP11.22□□□□□ -0.61
HDAC3-204ENST00000469207 SLC35E2P0CK97 266 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 BMP7P18075 431 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 PTX3P26022 381 aaPredicted RBP11.22□□□□□ -0.61
HDAC3-204ENST00000469207 BUD31P41223 144 aaPredicted RBP11.22□□□□□ -0.61
HDAC3-204ENST00000469207 PIK3CBP42338 1070 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 CASP3P42574 277 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 PAFAH1B1P43034 410 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 SLCO1A2P46721 670 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 ASCL1P50553 236 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 BIKQ13323 160 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 TOMM20Q15388 145 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 FLYWCH1Q4VC44 716 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 LIPJQ5W064 366 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 CYP20A1Q6UW02 462 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 CYS1Q717R9 158 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 TBC1D1Q86TI0 1168 aaPredicted RBP11.22□□□□□ -0.61
HDAC3-204ENST00000469207 YRDCQ86U90 279 aaKnown RBP11.22□□□□□ -0.61
HDAC3-204ENST00000469207 CCDC25Q86WR0 208 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 CHDHQ8NE62 594 aaPredicted RBP11.22□□□□□ -0.61
HDAC3-204ENST00000469207 WFDC11Q8NEX6 87 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 WDR20Q8TBZ3 569 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 SPPL2AQ8TCT8 520 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 FBF1Q8TES7 1133 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 UBTD2Q8WUN7 234 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 RNASE6Q93091 150 aaKnown RBP11.22□□□□□ -0.61
HDAC3-204ENST00000469207 ADIPOR1Q96A54 375 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 WDYHV1Q96HA8 205 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 TRIB1Q96RU8 372 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 UGT2B28Q9BY64 529 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 ANGPTL4Q9BY76 406 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 UBQLN3Q9H347 655 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 DDX31Q9H8H2 851 aaKnown RBP11.22□□□□□ -0.61
HDAC3-204ENST00000469207 ACTR8Q9H981 624 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 NMRAL1Q9HBL8 299 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 DLL4Q9NR61 685 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 QPCTLQ9NXS2 382 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 DTX4Q9Y2E6 619 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 RPH3AQ9Y2J0 694 aaPredicted RBP11.22□□□□□ -0.61
HDAC3-204ENST00000469207 ANGPTL3Q9Y5C1 460 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 PCDHGB3Q9Y5G1 929 aa11.22□□□□□ -0.61
HDAC3-204ENST00000469207 HMX2A2RU54 273 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 FAM47E-STBD1D6RA91 191 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 IL2RAP01589 272 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 HPNP05981 417 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 C2P06681 752 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 NR2F6P10588 404 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 S1PR1P21453 382 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 TIMP3P35625 211 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 CDK9P50750 372 aaKnown RBP11.21□□□□□ -0.61
HDAC3-204ENST00000469207 NAGLUP54802 743 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 PLTPP55058 493 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 FOXF2Q12947 444 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 CALCOCO2Q13137 446 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 DAZAP2Q15038 168 aaPredicted RBP11.21□□□□□ -0.61
HDAC3-204ENST00000469207 SETDB1Q15047 1291 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 POU4F3Q15319 338 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 RPS6KA2Q15349 733 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 NNATQ16517 81 aa11.21□□□□□ -0.61
HDAC3-204ENST00000469207 UBAP2Q5T6F2 1119 aaKnown RBP11.21□□□□□ -0.61
HDAC3-204ENST00000469207 MROH9Q5TGP6 573 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms