RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 ZFP90Q8TF47 636 aa16.4■□□□□ 0.22
RPL39-202ENST00000468844 UTP4Q969X6 686 aaKnown RBP16.4■□□□□ 0.22
RPL39-202ENST00000468844 TMEM125Q96AQ2 219 aa16.4■□□□□ 0.22
RPL39-202ENST00000468844 FKBP10Q96AY3 582 aa16.4■□□□□ 0.22
RPL39-202ENST00000468844 CLPTM1LQ96KA5 538 aa16.4■□□□□ 0.22
RPL39-202ENST00000468844 CDRT15Q96T59 188 aa16.4■□□□□ 0.22
RPL39-202ENST00000468844 THTPAQ9BU02 230 aa16.4■□□□□ 0.22
RPL39-202ENST00000468844 VN1R1Q9GZP7 353 aa16.4■□□□□ 0.22
RPL39-202ENST00000468844 POLR1BQ9H9Y6 1135 aa16.4■□□□□ 0.22
RPL39-202ENST00000468844 TMEM181Q9P2C4 612 aa16.4■□□□□ 0.22
RPL39-202ENST00000468844 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.4■□□□□ 0.22
RPL39-202ENST00000468844 PACSIN3Q9UKS6 424 aa16.4■□□□□ 0.22
RPL39-202ENST00000468844 ACSL6Q9UKU0 697 aa16.4■□□□□ 0.22
RPL39-202ENST00000468844 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.4■□□□□ 0.22
RPL39-202ENST00000468844 NME4O00746 187 aa16.39■□□□□ 0.21
RPL39-202ENST00000468844 SLC35E2P0CK97 266 aa16.39■□□□□ 0.21
RPL39-202ENST00000468844 SOAT1P35610 550 aa16.39■□□□□ 0.21
RPL39-202ENST00000468844 GABREP78334 506 aa16.39■□□□□ 0.21
RPL39-202ENST00000468844 TMEM107Q6UX40 140 aa16.39■□□□□ 0.21
RPL39-202ENST00000468844 BNC2Q6ZN30 1099 aaPredicted RBP16.39■□□□□ 0.21
RPL39-202ENST00000468844 DGAT2L6Q6ZPD8 337 aa16.39■□□□□ 0.21
RPL39-202ENST00000468844 C10orf111Q8N326 155 aa16.39■□□□□ 0.21
RPL39-202ENST00000468844 TRIML2Q8N7C3 387 aa16.39■□□□□ 0.21
RPL39-202ENST00000468844 OR8J3Q8NGG0 315 aa16.39■□□□□ 0.21
RPL39-202ENST00000468844 PPWD1Q96BP3 646 aaKnown RBP16.39■□□□□ 0.21
RPL39-202ENST00000468844 SLC35A5Q9BS91 424 aa16.39■□□□□ 0.21
RPL39-202ENST00000468844 TMEM121BQ9BXQ6 578 aaPredicted RBP16.39■□□□□ 0.21
RPL39-202ENST00000468844 SOX17Q9H6I2 414 aaPredicted RBP16.39■□□□□ 0.21
RPL39-202ENST00000468844 TPT1P8Q9HAU6 139 aa16.39■□□□□ 0.21
RPL39-202ENST00000468844 C14orf105Q9NVL8 296 aa16.39■□□□□ 0.21
RPL39-202ENST00000468844 CMTM6Q9NX76 183 aa16.39■□□□□ 0.21
RPL39-202ENST00000468844 MC3RP41968 323 aa16.39■□□□□ 0.21
RPL39-202ENST00000468844 ZNF628Q5EBL2 1059 aa16.39■□□□□ 0.21
RPL39-202ENST00000468844 GPR155Q7Z3F1 870 aa16.39■□□□□ 0.21
RPL39-202ENST00000468844 RNF148Q8N7C7 305 aa16.39■□□□□ 0.21
RPL39-202ENST00000468844 PNPT1Q8TCS8 783 aaKnown RBP16.39■□□□□ 0.21
RPL39-202ENST00000468844 KAT2AQ92830 837 aa16.39■□□□□ 0.21
RPL39-202ENST00000468844 MCUR1Q96AQ8 359 aa16.39■□□□□ 0.21
RPL39-202ENST00000468844 FAM120BQ96EK7 910 aaKnown RBP16.39■□□□□ 0.21
RPL39-202ENST00000468844 SLC46A1Q96NT5 459 aa16.39■□□□□ 0.21
RPL39-202ENST00000468844 CPPED1Q9BRF8 314 aaPredicted RBP16.39■□□□□ 0.21
RPL39-202ENST00000468844 ANKRA2Q9H9E1 313 aa16.39■□□□□ 0.21
RPL39-202ENST00000468844 DOCK10Q96BY6 2186 aa16.38■□□□□ 0.21
RPL39-202ENST00000468844 C15orf38-AP3S2A0A0A6YYH1 394 aa16.38■□□□□ 0.21
RPL39-202ENST00000468844 RNF103-CHMP3A0A140T963 221 aa16.38■□□□□ 0.21
RPL39-202ENST00000468844 TCRBV16S1A1N1A0A5B0 115 aa16.38■□□□□ 0.21
RPL39-202ENST00000468844 IDSB3KWA1 339 aa16.38■□□□□ 0.21
RPL39-202ENST00000468844 CLIC1O00299 241 aa16.38■□□□□ 0.21
RPL39-202ENST00000468844 SORBS2O94875 1100 aaKnown RBP16.38■□□□□ 0.21
RPL39-202ENST00000468844 CT62P0C5K7 136 aa16.38■□□□□ 0.21
RPL39-202ENST00000468844 UQCRC2P22695 453 aa16.38■□□□□ 0.21
RPL39-202ENST00000468844 PGM1P36871 562 aa16.38■□□□□ 0.21
RPL39-202ENST00000468844 STT3AP46977 705 aa16.38■□□□□ 0.21
RPL39-202ENST00000468844 PRICKLE4Q2TBC4 344 aa16.38■□□□□ 0.21
RPL39-202ENST00000468844 C6orf15Q6UXA7 325 aaPredicted RBP16.38■□□□□ 0.21
RPL39-202ENST00000468844 ARPINQ7Z6K5 226 aa16.38■□□□□ 0.21
RPL39-202ENST00000468844 SIMC1Q8NDZ2 872 aa16.38■□□□□ 0.21
RPL39-202ENST00000468844 ELP4Q96EB1 424 aa16.38■□□□□ 0.21
RPL39-202ENST00000468844 RBM18Q96H35 190 aaKnown RBP16.38■□□□□ 0.21
RPL39-202ENST00000468844 WDR54Q9H977 334 aa16.38■□□□□ 0.21
RPL39-202ENST00000468844 GPATCH2Q9NW75 528 aa16.38■□□□□ 0.21
RPL39-202ENST00000468844 ADA2Q9NZK5 511 aa16.38■□□□□ 0.21
RPL39-202ENST00000468844 PRPF19Q9UMS4 504 aaKnown RBP16.38■□□□□ 0.21
RPL39-202ENST00000468844 DMXL2Q8TDJ6 3036 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 PRORSD1PA6NEY8 169 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 NT5EP21589 574 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 SDHBP21912 280 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 CCT3P49368 545 aaKnown RBP16.37■□□□□ 0.21
RPL39-202ENST00000468844 MVDP53602 400 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 MGAT2Q10469 447 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 CEACAM7Q14002 265 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 SERTAD2Q14140 314 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 NCF4Q15080 339 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 NSDHLQ15738 373 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 PIGGQ5H8A4 983 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 ULK2Q8IYT8 1036 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 PLPP5Q8NEB5 264 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 OR7G2Q8NG99 324 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 ZNF675Q8TD23 568 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 DOK4Q8TEW6 326 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 THUMPD3Q9BV44 507 aaKnown RBP16.37■□□□□ 0.21
RPL39-202ENST00000468844 B3GNT4Q9C0J1 378 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 SEMA3GQ9NS98 782 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 MAT2BQ9NZL9 334 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 GMPR2Q9P2T1 348 aaKnown RBP16.37■□□□□ 0.21
RPL39-202ENST00000468844 PADI1Q9ULC6 663 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 GMEB1Q9Y692 573 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 ACACAQ13085 2346 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 OR10H2O60403 315 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 ATP6V1G2O95670 118 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 NQO1P15559 274 aaKnown RBP16.37■□□□□ 0.21
RPL39-202ENST00000468844 SLC5A2P31639 672 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 RIPK1Q13546 671 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 TRMT12Q53H54 448 aaKnown RBP16.37■□□□□ 0.21
RPL39-202ENST00000468844 FAM69BQ5VUD6 431 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 PGM2L1Q6PCE3 622 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 FAM111BQ6SJ93 734 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 TMEM64Q6YI46 380 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 LANCL3Q6ZV70 420 aa16.37■□□□□ 0.21
RPL39-202ENST00000468844 CTHRC1Q96CG8 243 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms