RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 RELTQ969Z4 430 aa10.67□□□□□ -0.7
CDHR3-205ENST00000468143 KLHL29Q96CT2 875 aa10.67□□□□□ -0.7
CDHR3-205ENST00000468143 MAGED4Q96JG8 741 aa10.67□□□□□ -0.7
CDHR3-205ENST00000468143 FAIM2Q9BWQ8 316 aa10.67□□□□□ -0.7
CDHR3-205ENST00000468143 BRINP2Q9C0B6 783 aa10.67□□□□□ -0.7
CDHR3-205ENST00000468143 WWTR1Q9GZV5 400 aa10.67□□□□□ -0.7
CDHR3-205ENST00000468143 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.67□□□□□ -0.7
CDHR3-205ENST00000468143 SLC17A7Q9P2U7 560 aa10.67□□□□□ -0.7
CDHR3-205ENST00000468143 MCM8Q9UJA3 840 aa10.67□□□□□ -0.7
CDHR3-205ENST00000468143 TINAGQ9UJW2 476 aa10.67□□□□□ -0.7
CDHR3-205ENST00000468143 DLGAP4Q9Y2H0 992 aa10.67□□□□□ -0.7
CDHR3-205ENST00000468143 PLLPQ9Y342 182 aa10.67□□□□□ -0.7
CDHR3-205ENST00000468143 FIS1Q9Y3D6 152 aa10.67□□□□□ -0.7
CDHR3-205ENST00000468143 ESPL1Q14674 2120 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 A0A1B0GTH9 108 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 C2orf92A0A1B0GVN3 265 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 CCDC151A5D8V7 595 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 GOLGA6L10A6NI86 522 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 ESPNB1AK53 854 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 LRATO95237 230 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 P04436 131 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 CCL3P10147 92 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 CREB1P16220 341 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 ABOP16442 354 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 CSNK2A2P19784 350 aaPredicted RBP10.66□□□□□ -0.7
CDHR3-205ENST00000468143 ALDH3A1P30838 453 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 CA7P43166 264 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 DNASE1L1P49184 302 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 PER3P56645 1201 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 PPIAP62937 165 aaKnown RBP10.66□□□□□ -0.7
CDHR3-205ENST00000468143 TRA2BP62995 288 aaKnown RBP10.66□□□□□ -0.7
CDHR3-205ENST00000468143 ACSM2AQ08AH3 577 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 FUT7Q11130 342 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 PCLAFQ15004 111 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 EBPQ15125 230 aaKnown RBP10.66□□□□□ -0.7
CDHR3-205ENST00000468143 LTB4RQ15722 352 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 IMPG1Q17R60 797 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 ZNF791Q3KP31 576 aaPredicted RBP10.66□□□□□ -0.7
CDHR3-205ENST00000468143 CMPK2Q5EBM0 449 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 LIPMQ5VYY2 423 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 ACSM2BQ68CK6 577 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 CLEC6AQ6EIG7 209 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 EMBQ6PCB8 327 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 LYPD8Q6UX82 237 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 C3P1Q6ZMU1 363 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 FAM47EQ6ZV65 393 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 NCCRP1Q6ZVX7 275 aaPredicted RBP10.66□□□□□ -0.7
CDHR3-205ENST00000468143 FGD2Q7Z6J4 655 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 CCDC116Q8IYX3 515 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 GHDCQ8N2G8 530 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 ZNF615Q8N8J6 731 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 BANPQ8N9N5 519 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 ZFP62Q8NB50 900 aaPredicted RBP10.66□□□□□ -0.7
CDHR3-205ENST00000468143 POGLUT1Q8NBL1 392 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 FAM13CQ8NE31 585 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 CDC26Q8NHZ8 85 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 C16orf78Q8WTQ4 265 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 CAVIN3Q969G5 261 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 EXOSC8Q96B26 276 aaKnown RBP10.66□□□□□ -0.7
CDHR3-205ENST00000468143 CNRIP1Q96F85 164 aaPredicted RBP10.66□□□□□ -0.7
CDHR3-205ENST00000468143 FAM111AQ96PZ2 611 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 GATA5Q9BWX5 397 aaPredicted RBP10.66□□□□□ -0.7
CDHR3-205ENST00000468143 IQCGQ9H095 443 aaKnown RBP10.66□□□□□ -0.7
CDHR3-205ENST00000468143 OR10A5Q9H207 317 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 PFDN4Q9NQP4 134 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 SACM1LQ9NTJ5 587 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 BCAP29Q9UHQ4 241 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 UTS2RQ9UKP6 389 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 ZNF835Q9Y2P0 537 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 PTGDR2Q9Y5Y4 395 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 ZNF780BQ9Y6R6 833 aa10.66□□□□□ -0.7
CDHR3-205ENST00000468143 OR6C76A6NM76 312 aa10.65□□□□□ -0.7
CDHR3-205ENST00000468143 TRIM13O60858 407 aa10.65□□□□□ -0.7
CDHR3-205ENST00000468143 ANXA4P09525 319 aaPredicted RBP10.65□□□□□ -0.7
CDHR3-205ENST00000468143 ESRRAP11474 423 aaPredicted RBP10.65□□□□□ -0.7
CDHR3-205ENST00000468143 S1PR1P21453 382 aa10.65□□□□□ -0.7
CDHR3-205ENST00000468143 TIA1P31483 386 aaKnown RBP eCLIP10.65□□□□□ -0.7
CDHR3-205ENST00000468143 CASP6P55212 293 aa10.65□□□□□ -0.7
CDHR3-205ENST00000468143 MGAT2Q10469 447 aa10.65□□□□□ -0.7
CDHR3-205ENST00000468143 EXOSC7Q15024 291 aaKnown RBP10.65□□□□□ -0.7
CDHR3-205ENST00000468143 PRICKLE4Q2TBC4 344 aa10.65□□□□□ -0.7
CDHR3-205ENST00000468143 TRMT12Q53H54 448 aaKnown RBP10.65□□□□□ -0.7
CDHR3-205ENST00000468143 SPIN4Q56A73 249 aa10.65□□□□□ -0.7
CDHR3-205ENST00000468143 C6orf163Q5TEZ5 329 aa10.65□□□□□ -0.7
CDHR3-205ENST00000468143 PRAMEF20Q5VT98 475 aa10.65□□□□□ -0.7
CDHR3-205ENST00000468143 HLA-DQA1Q5Y7H0 255 aa10.65□□□□□ -0.7
CDHR3-205ENST00000468143 SLC22A10Q63ZE4 541 aa10.65□□□□□ -0.7
CDHR3-205ENST00000468143 MAMDC2Q7Z304 686 aaPredicted RBP10.65□□□□□ -0.7
CDHR3-205ENST00000468143 CHERPQ8IWX8 916 aaKnown RBP10.65□□□□□ -0.7
CDHR3-205ENST00000468143 PRR22Q8IZ63 422 aa10.65□□□□□ -0.7
CDHR3-205ENST00000468143 RIBC1Q8N443 379 aaPredicted RBP10.65□□□□□ -0.7
CDHR3-205ENST00000468143 SLC15A4Q8N697 577 aa10.65□□□□□ -0.7
CDHR3-205ENST00000468143 GOLM1Q8NBJ4 401 aa10.65□□□□□ -0.7
CDHR3-205ENST00000468143 CCDC120Q96HB5 630 aa10.65□□□□□ -0.7
CDHR3-205ENST00000468143 APOPT1Q96IL0 206 aa10.65□□□□□ -0.7
CDHR3-205ENST00000468143 SGCZQ96LD1 299 aa10.65□□□□□ -0.7
CDHR3-205ENST00000468143 ZNF681Q96N22 645 aa10.65□□□□□ -0.7
CDHR3-205ENST00000468143 FAM173AQ9BQD7 235 aa10.65□□□□□ -0.7
CDHR3-205ENST00000468143 MECRQ9BV79 373 aa10.65□□□□□ -0.7
CDHR3-205ENST00000468143 TTTY12Q9BZ98 90 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms