RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 SAMD14Q8IZD0 417 aaPredicted RBP12.93□□□□□ -0.34
UBA3-209ENST00000466763 OR1N1Q8NGS0 311 aa12.93□□□□□ -0.34
UBA3-209ENST00000466763 ZNF721Q8TF20 911 aa12.93□□□□□ -0.34
UBA3-209ENST00000466763 PPCDCQ96CD2 204 aa12.93□□□□□ -0.34
UBA3-209ENST00000466763 C7orf26Q96N11 449 aa12.93□□□□□ -0.34
UBA3-209ENST00000466763 LMF1Q96S06 567 aa12.93□□□□□ -0.34
UBA3-209ENST00000466763 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.93□□□□□ -0.34
UBA3-209ENST00000466763 REEP4Q9H6H4 257 aa12.93□□□□□ -0.34
UBA3-209ENST00000466763 LIN28AQ9H9Z2 209 aaKnown RBP12.93□□□□□ -0.34
UBA3-209ENST00000466763 CXorf21Q9HAI6 301 aa12.93□□□□□ -0.34
UBA3-209ENST00000466763 NOP53Q9NZM5 478 aaKnown RBP12.93□□□□□ -0.34
UBA3-209ENST00000466763 EHD3Q9NZN3 535 aa12.93□□□□□ -0.34
UBA3-209ENST00000466763 BCAP29Q9UHQ4 241 aa12.93□□□□□ -0.34
UBA3-209ENST00000466763 LOC400499M0QZD8 3231 aa12.92□□□□□ -0.34
UBA3-209ENST00000466763 TCP11X1B4DZS4 312 aa12.92□□□□□ -0.34
UBA3-209ENST00000466763 PRKNO60260 465 aaPredicted RBP12.92□□□□□ -0.34
UBA3-209ENST00000466763 MAN1A2O60476 641 aa12.92□□□□□ -0.34
UBA3-209ENST00000466763 DIAPH2O60879 1101 aa12.92□□□□□ -0.34
UBA3-209ENST00000466763 CT62P0C5K7 136 aa12.92□□□□□ -0.34
UBA3-209ENST00000466763 SSTR4P31391 388 aa12.92□□□□□ -0.34
UBA3-209ENST00000466763 GALNSP34059 522 aa12.92□□□□□ -0.34
UBA3-209ENST00000466763 MPIP34949 423 aa12.92□□□□□ -0.34
UBA3-209ENST00000466763 SOX11P35716 441 aa12.92□□□□□ -0.34
UBA3-209ENST00000466763 GPR143P51810 404 aa12.92□□□□□ -0.34
UBA3-209ENST00000466763 NCBP2P52298 156 aaKnown RBP eCLIP12.92□□□□□ -0.34
UBA3-209ENST00000466763 LSM11P83369 360 aaKnown RBP eCLIP12.92□□□□□ -0.34
UBA3-209ENST00000466763 OC90Q02509 493 aaPredicted RBP12.92□□□□□ -0.34
UBA3-209ENST00000466763 DUSP2Q05923 314 aa12.92□□□□□ -0.34
UBA3-209ENST00000466763 PTGR1Q14914 329 aa12.92□□□□□ -0.34
UBA3-209ENST00000466763 PRSS53Q2L4Q9 553 aa12.92□□□□□ -0.34
UBA3-209ENST00000466763 SPRED3Q2MJR0 410 aa12.92□□□□□ -0.34
UBA3-209ENST00000466763 H3F3CQ6NXT2 135 aa12.92□□□□□ -0.34
UBA3-209ENST00000466763 R3HCC1LQ7Z5L2 792 aaKnown RBP12.92□□□□□ -0.34
UBA3-209ENST00000466763 FAM9CQ8IZT9 166 aa12.92□□□□□ -0.34
UBA3-209ENST00000466763 BEST3Q8N1M1 668 aa12.92□□□□□ -0.34
UBA3-209ENST00000466763 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.92□□□□□ -0.34
UBA3-209ENST00000466763 KAT2AQ92830 837 aa12.92□□□□□ -0.34
UBA3-209ENST00000466763 FBXL20Q96IG2 436 aa12.92□□□□□ -0.34
UBA3-209ENST00000466763 ZNF681Q96N22 645 aa12.92□□□□□ -0.34
UBA3-209ENST00000466763 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.92□□□□□ -0.34
UBA3-209ENST00000466763 ANKRD10Q9NXR5 420 aa12.92□□□□□ -0.34
UBA3-209ENST00000466763 LUZP4Q9P127 313 aa12.92□□□□□ -0.34
UBA3-209ENST00000466763 ZNF223Q9UK11 482 aaPredicted RBP12.92□□□□□ -0.34
UBA3-209ENST00000466763 PPIEQ9UNP9 301 aaKnown RBP12.92□□□□□ -0.34
UBA3-209ENST00000466763 EXO1Q9UQ84 846 aaKnown RBP12.92□□□□□ -0.34
UBA3-209ENST00000466763 HEMK1Q9Y5R4 338 aaPredicted RBP12.92□□□□□ -0.34
UBA3-209ENST00000466763 USH1CQ9Y6N9 552 aa12.92□□□□□ -0.34
UBA3-209ENST00000466763 GABRR3A8MPY1 467 aa12.91□□□□□ -0.34
UBA3-209ENST00000466763 WWP2O00308 870 aa12.91□□□□□ -0.34
UBA3-209ENST00000466763 FCHO1O14526 889 aa12.91□□□□□ -0.34
UBA3-209ENST00000466763 PDPK1O15530 556 aa12.91□□□□□ -0.34
UBA3-209ENST00000466763 WDPCPO95876 746 aa12.91□□□□□ -0.34
UBA3-209ENST00000466763 DDX5P17844 614 aaKnown RBP12.91□□□□□ -0.34
UBA3-209ENST00000466763 CD97P48960 835 aa12.91□□□□□ -0.34
UBA3-209ENST00000466763 DIO3P55073 304 aa12.91□□□□□ -0.34
UBA3-209ENST00000466763 NME5P56597 212 aa12.91□□□□□ -0.34
UBA3-209ENST00000466763 RNF4P78317 190 aa12.91□□□□□ -0.34
UBA3-209ENST00000466763 KLRB1Q12918 225 aa12.91□□□□□ -0.34
UBA3-209ENST00000466763 EXOSC7Q15024 291 aaKnown RBP12.91□□□□□ -0.34
UBA3-209ENST00000466763 SMU1Q2TAY7 513 aa12.91□□□□□ -0.34
UBA3-209ENST00000466763 NADK2Q4G0N4 442 aa12.91□□□□□ -0.34
UBA3-209ENST00000466763 SLC9B1Q4ZJI4 515 aa12.91□□□□□ -0.34
UBA3-209ENST00000466763 HLA-DQA1Q5Y7H0 255 aa12.91□□□□□ -0.34
UBA3-209ENST00000466763 C16orf47Q6ZP98 133 aaPredicted RBP12.91□□□□□ -0.34
UBA3-209ENST00000466763 SLC29A4Q7RTT9 530 aa12.91□□□□□ -0.34
UBA3-209ENST00000466763 HPS6Q86YV9 775 aa12.91□□□□□ -0.34
UBA3-209ENST00000466763 VWA5B2Q8N398 1253 aa12.91□□□□□ -0.34
UBA3-209ENST00000466763 RBMXL3Q8N7X1 1067 aaKnown RBP12.91□□□□□ -0.34
UBA3-209ENST00000466763 CATSPER1Q8NEC5 780 aa12.91□□□□□ -0.34
UBA3-209ENST00000466763 OR5L2Q8NGL0 311 aa12.91□□□□□ -0.34
UBA3-209ENST00000466763 OR9A2Q8NGT5 310 aa12.91□□□□□ -0.34
UBA3-209ENST00000466763 THOC1Q96FV9 657 aaKnown RBP12.91□□□□□ -0.34
UBA3-209ENST00000466763 GAL3ST4Q96RP7 486 aa12.91□□□□□ -0.34
UBA3-209ENST00000466763 NPAS2Q99743 824 aa12.91□□□□□ -0.34
UBA3-209ENST00000466763 UTP23Q9BRU9 249 aaKnown RBP12.91□□□□□ -0.34
UBA3-209ENST00000466763 SPTA1P02549 2419 aa12.91□□□□□ -0.34
UBA3-209ENST00000466763 IGSF10Q6WRI0 2623 aa12.91□□□□□ -0.34
UBA3-209ENST00000466763 MYO1GB0I1T2 1018 aa12.9□□□□□ -0.34
UBA3-209ENST00000466763 ITGA10O75578 1167 aa12.9□□□□□ -0.34
UBA3-209ENST00000466763 ATP1B1P05026 303 aa12.9□□□□□ -0.34
UBA3-209ENST00000466763 PCSK2P16519 638 aa12.9□□□□□ -0.34
UBA3-209ENST00000466763 EFNA1P20827 205 aaPredicted RBP12.9□□□□□ -0.34
UBA3-209ENST00000466763 GPC1P35052 558 aa12.9□□□□□ -0.34
UBA3-209ENST00000466763 RPL3P39023 403 aaKnown RBP12.9□□□□□ -0.34
UBA3-209ENST00000466763 CASRP41180 1078 aa12.9□□□□□ -0.34
UBA3-209ENST00000466763 MLF1P58340 268 aa12.9□□□□□ -0.34
UBA3-209ENST00000466763 MRPS35P82673 323 aaKnown RBP12.9□□□□□ -0.34
UBA3-209ENST00000466763 MAP4K2Q12851 820 aa12.9□□□□□ -0.34
UBA3-209ENST00000466763 RPS6KA2Q15349 733 aa12.9□□□□□ -0.34
UBA3-209ENST00000466763 PRICKLE4Q2TBC4 344 aa12.9□□□□□ -0.34
UBA3-209ENST00000466763 PGS1Q32NB8 556 aa12.9□□□□□ -0.34
UBA3-209ENST00000466763 TRMT12Q53H54 448 aaKnown RBP12.9□□□□□ -0.34
UBA3-209ENST00000466763 ZNF385BQ569K4 471 aa12.9□□□□□ -0.34
UBA3-209ENST00000466763 CPTPQ5TA50 214 aa12.9□□□□□ -0.34
UBA3-209ENST00000466763 ACAD11Q709F0 780 aa12.9□□□□□ -0.34
UBA3-209ENST00000466763 LARP4Q71RC2 724 aaKnown RBP eCLIP12.9□□□□□ -0.34
UBA3-209ENST00000466763 SPATA19Q7Z5L4 167 aa12.9□□□□□ -0.34
UBA3-209ENST00000466763 TMEM156Q8N614 296 aa12.9□□□□□ -0.34
UBA3-209ENST00000466763 KRTCAP2Q8N6L1 136 aa12.9□□□□□ -0.34
UBA3-209ENST00000466763 OR7A2PQ8NGA2 310 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms