RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 VPS37AQ8NEZ2 397 aa16.31■□□□□ 0.2
CPSF4-209ENST00000465132 RBM18Q96H35 190 aaKnown RBP16.31■□□□□ 0.2
CPSF4-209ENST00000465132 AGAP4Q96P64 663 aa16.31■□□□□ 0.2
CPSF4-209ENST00000465132 TSSK3Q96PN8 268 aa16.31■□□□□ 0.2
CPSF4-209ENST00000465132 TMEM120AQ9BXJ8 343 aa16.31■□□□□ 0.2
CPSF4-209ENST00000465132 DPY30Q9C005 99 aa16.31■□□□□ 0.2
CPSF4-209ENST00000465132 VN1R1Q9GZP7 353 aa16.31■□□□□ 0.2
CPSF4-209ENST00000465132 REEP4Q9H6H4 257 aa16.31■□□□□ 0.2
CPSF4-209ENST00000465132 LANCL2Q9NS86 450 aa16.31■□□□□ 0.2
CPSF4-209ENST00000465132 TAS2R7Q9NYW3 318 aa16.31■□□□□ 0.2
CPSF4-209ENST00000465132 HS3ST3B1Q9Y662 390 aa16.31■□□□□ 0.2
CPSF4-209ENST00000465132 ICAM2P13598 275 aa16.3■□□□□ 0.2
CPSF4-209ENST00000465132 CSNK2A2P19784 350 aaPredicted RBP16.3■□□□□ 0.2
CPSF4-209ENST00000465132 MPIP34949 423 aa16.3■□□□□ 0.2
CPSF4-209ENST00000465132 CLDN8P56748 225 aa16.3■□□□□ 0.2
CPSF4-209ENST00000465132 C21orf58P58505 322 aa16.3■□□□□ 0.2
CPSF4-209ENST00000465132 PLIN5Q00G26 463 aa16.3■□□□□ 0.2
CPSF4-209ENST00000465132 SRSF11Q05519 484 aaKnown RBP16.3■□□□□ 0.2
CPSF4-209ENST00000465132 IRAK1BP1Q5VVH5 260 aa16.3■□□□□ 0.2
CPSF4-209ENST00000465132 FAM71E1Q6IPT2 247 aa16.3■□□□□ 0.2
CPSF4-209ENST00000465132 SHISA6Q6ZSJ9 500 aa16.3■□□□□ 0.2
CPSF4-209ENST00000465132 SCUBE1Q8IWY4 988 aa16.3■□□□□ 0.2
CPSF4-209ENST00000465132 PRSS58Q8IYP2 241 aa16.3■□□□□ 0.2
CPSF4-209ENST00000465132 MIER2Q8N344 545 aa16.3■□□□□ 0.2
CPSF4-209ENST00000465132 ZFP28Q8NHY6 868 aa16.3■□□□□ 0.2
CPSF4-209ENST00000465132 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.3■□□□□ 0.2
CPSF4-209ENST00000465132 DNAJB14Q8TBM8 379 aa16.3■□□□□ 0.2
CPSF4-209ENST00000465132 PPCDCQ96CD2 204 aa16.3■□□□□ 0.2
CPSF4-209ENST00000465132 KLHL29Q96CT2 875 aa16.3■□□□□ 0.2
CPSF4-209ENST00000465132 BRINP2Q9C0B6 783 aa16.3■□□□□ 0.2
CPSF4-209ENST00000465132 AIG1Q9NVV5 245 aa16.3■□□□□ 0.2
CPSF4-209ENST00000465132 TEX10Q9NXF1 929 aaPredicted RBP16.3■□□□□ 0.2
CPSF4-209ENST00000465132 UTS2RQ9UKP6 389 aa16.3■□□□□ 0.2
CPSF4-209ENST00000465132 CDC123O75794 336 aaPredicted RBP16.29■□□□□ 0.2
CPSF4-209ENST00000465132 SLITRK5O94991 958 aa16.29■□□□□ 0.2
CPSF4-209ENST00000465132 G6PDP11413 515 aa16.29■□□□□ 0.2
CPSF4-209ENST00000465132 NCF2P19878 526 aaPredicted RBP16.29■□□□□ 0.2
CPSF4-209ENST00000465132 NTSP30990 170 aa16.29■□□□□ 0.2
CPSF4-209ENST00000465132 GALNSP34059 522 aa16.29■□□□□ 0.2
CPSF4-209ENST00000465132 ATP4BP51164 291 aa16.29■□□□□ 0.2
CPSF4-209ENST00000465132 SNRPNP63162 240 aaKnown RBP16.29■□□□□ 0.2
CPSF4-209ENST00000465132 RHAGQ02094 409 aa16.29■□□□□ 0.2
CPSF4-209ENST00000465132 TERF2Q15554 542 aa16.29■□□□□ 0.2
CPSF4-209ENST00000465132 PDCD4Q53EL6 469 aaKnown RBP16.29■□□□□ 0.2
CPSF4-209ENST00000465132 CPTPQ5TA50 214 aa16.29■□□□□ 0.2
CPSF4-209ENST00000465132 C18orf63Q68DL7 685 aa16.29■□□□□ 0.2
CPSF4-209ENST00000465132 MAVSQ7Z434 540 aa16.29■□□□□ 0.2
CPSF4-209ENST00000465132 ST13P4Q8IZP2 240 aaPredicted RBP16.29■□□□□ 0.2
CPSF4-209ENST00000465132 DAZLQ92904 295 aaKnown RBP16.29■□□□□ 0.2
CPSF4-209ENST00000465132 ART5Q96L15 291 aa16.29■□□□□ 0.2
CPSF4-209ENST00000465132 DGAT2Q96PD7 388 aa16.29■□□□□ 0.2
CPSF4-209ENST00000465132 OR52B2Q96RD2 323 aa16.29■□□□□ 0.2
CPSF4-209ENST00000465132 CSF3RQ99062 836 aa16.29■□□□□ 0.2
CPSF4-209ENST00000465132 ALOXE3Q9BYJ1 711 aa16.29■□□□□ 0.2
CPSF4-209ENST00000465132 RBCK1Q9BYM8 510 aa16.29■□□□□ 0.2
CPSF4-209ENST00000465132 LHPPQ9H008 270 aa16.29■□□□□ 0.2
CPSF4-209ENST00000465132 FAM107BQ9H098 131 aa16.29■□□□□ 0.2
CPSF4-209ENST00000465132 ZIM2Q9NZV7 527 aa16.29■□□□□ 0.2
CPSF4-209ENST00000465132 CROCCQ5TZA2 2017 aa16.29■□□□□ 0.2
CPSF4-209ENST00000465132 TCRBV16S1A1N1A0A5B0 115 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 DYTNA2CJ06 578 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 E9PBE3 544 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 FAM227AF5H4B4 570 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 OR10H2O60403 315 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 CCDC22O60826 627 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 SHOX2O60902 331 aaPredicted RBP16.28■□□□□ 0.2
CPSF4-209ENST00000465132 ERAL1O75616 437 aaKnown RBP16.28■□□□□ 0.2
CPSF4-209ENST00000465132 SLC22A3O75751 556 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 IFNA16P05015 189 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 SLC35E2P0CK97 266 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 PORP16435 677 aaPredicted RBP16.28■□□□□ 0.2
CPSF4-209ENST00000465132 TNNI3P19429 210 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 MRPL19P49406 292 aaKnown RBP16.28■□□□□ 0.2
CPSF4-209ENST00000465132 XKP51811 444 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 SEC24CP53992 1094 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 OR4D2P58180 307 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 FOLH1Q04609 750 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 SQLEQ14534 574 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 ZNF169Q14929 603 aaPredicted RBP16.28■□□□□ 0.2
CPSF4-209ENST00000465132 GKAP1Q5VSY0 366 aaPredicted RBP16.28■□□□□ 0.2
CPSF4-209ENST00000465132 B3GNTL1Q67FW5 361 aaPredicted RBP16.28■□□□□ 0.2
CPSF4-209ENST00000465132 TMEM205Q6UW68 189 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 OR11G2Q8NGC1 345 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 RFWD2Q8NHY2 731 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 GRHL3Q8TE85 626 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 TESCQ96BS2 214 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 THOC1Q96FV9 657 aaKnown RBP16.28■□□□□ 0.2
CPSF4-209ENST00000465132 BBS4Q96RK4 519 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 LPAR4Q99677 370 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 ELAC2Q9BQ52 826 aaKnown RBP16.28■□□□□ 0.2
CPSF4-209ENST00000465132 EBF4Q9BQW3 602 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 TUBB6Q9BUF5 446 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 ADAP2Q9NPF8 381 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 SLC35C2Q9NQQ7 365 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.28■□□□□ 0.2
CPSF4-209ENST00000465132 GIMAP2Q9UG22 337 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 BAIAP2L1Q9UHR4 511 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 ATP6V1HQ9UI12 483 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 CLCA3PQ9Y6N3 262 aa16.28■□□□□ 0.2
CPSF4-209ENST00000465132 CACNA1DQ01668 2161 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms