RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 RFWD3Q6PCD5 774 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 FAM159AQ6UWV7 190 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 OLFM4Q6UX06 510 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 CCBE1Q6UXH8 406 aaPredicted RBP1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 Q6ZRG5 221 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 TOM1L2Q6ZVM7 507 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 MIER3Q7Z3K6 550 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 YRDCQ86U90 279 aaKnown RBP1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 SLC47A2Q86VL8 602 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 BATF2Q8N1L9 274 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 HDDC3Q8N4P3 179 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 ZNF491Q8N8L2 437 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 CCNYQ8ND76 341 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 DQX1Q8TE96 717 aaKnown RBP1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 RASL10AQ92737 203 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 HIST1H2ACQ93077 130 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 CCDC51Q96ER9 411 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 CXorf58Q96LI9 332 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 ZNF597Q96LX8 424 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 FOXN4Q96NZ1 517 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 TMEM237Q96Q45 408 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 CPXM1Q96SM3 734 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 RUFY1Q96T51 708 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 COQ7Q99807 217 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 C19orf43Q9BQ61 176 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 TTYH2Q9BSA4 534 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 FUNDC2Q9BWH2 189 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 RAB11FIP5Q9BXF6 653 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 TNMDQ9H2S6 317 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 DCTPP1Q9H773 170 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 SLC25A19Q9HC21 320 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 SYTL2Q9HCH5 934 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 NINJ2Q9NZG7 142 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 MBD2Q9UBB5 411 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 LHX3Q9UBR4 397 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 MLXQ9UH92 298 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 CCPG1Q9ULG6 757 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 PLEKHA6Q9Y2H5 1048 aa1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 MRPL11Q9Y3B7 192 aaKnown RBP1.51□□□□□ -2.17
NUCKS1-202ENST00000464938 CUX2O14529 1486 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 CFAP73A6NFT4 308 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 ACOD1A6NK06 481 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 E9PMD0 336 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 SGK494L7N484 410 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 PDLIM1O00151 329 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 SH2D1BO14796 132 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 GMNNO75496 209 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 STK17BO94768 372 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 TOXO94900 526 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 HPRP00739 348 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 SLC4A1P02730 911 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 GP9P14770 177 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 MARCKSP29966 332 aaPredicted RBP1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 ID1P41134 155 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 ACADSBP45954 432 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 NUMBP49757 651 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 CSRP3P50461 194 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 SGSHP51688 502 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 LMO4P61968 165 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 RPS4XP62701 263 aaKnown RBP1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 NAAAQ02083 359 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 ACY1Q03154 408 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 FCHO2Q0JRZ9 810 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 PPP1R8Q12972 351 aaKnown RBP1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 KRT31Q15323 416 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 CD226Q15762 336 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 CLPPQ16740 277 aaPredicted RBP1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 HKDC1Q2TB90 917 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 ZNF699Q32M78 642 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 LRIT3Q3SXY7 679 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 ACSF3Q4G176 576 aaPredicted RBP1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 PARP10Q53GL7 1025 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 UNC50Q53HI1 259 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 TCTEX1D4Q5JR98 221 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 ZNF506Q5JVG8 444 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 STEAP1BQ6NZ63 245 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 EMBQ6PCB8 327 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 ATRAIDQ6UW56 229 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 MFSD7Q6UXD7 560 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 ZNF841Q6ZN19 808 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 STXBP4Q6ZWJ1 553 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 TMUB2Q71RG4 321 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 TIPARPQ7Z3E1 657 aaKnown RBP1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 GTSCR1Q86UQ5 136 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 AMZ2Q86W34 360 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 MARCH9Q86YJ5 346 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 ERC1Q8IUD2 1116 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 LRRC49Q8IUZ0 686 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 HSCBQ8IWL3 235 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 LINC00518Q8N0U6 118 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 RNF148Q8N7C7 305 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 SAMD12Q8N8I0 201 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 ARL10Q8N8L6 244 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 MINDY2Q8NBR6 621 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 RELL2Q8NC24 303 aaPredicted RBP1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 CNNM3Q8NE01 707 aa1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 ZNF397Q8NF99 534 aaPredicted RBP1.5□□□□□ -2.17
NUCKS1-202ENST00000464938 BEST4Q8NFU0 473 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms