RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 SGTAO43765 313 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 SH3BP5O60239 455 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 HPGDSO60760 199 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 SEMA7AO75326 666 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 ZNF821O75541 412 aaPredicted RBP6.92□□□□□ -1.3
USP48-206ENST00000464577 SOD1P00441 154 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 CATP04040 527 aaKnown RBP6.92□□□□□ -1.3
USP48-206ENST00000464577 EVI2BP34910 448 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 OPRD1P41143 372 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 SPINT3P49223 89 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 INPP1P49441 399 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 DGKEP52429 567 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 ATP12AP54707 1039 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 CDK5Q00535 292 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 FABP5Q01469 135 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 C2orf80Q0P641 193 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 ADAM15Q13444 863 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 IL18Q14116 193 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 P2RY14Q15391 338 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 MINDY4Q4G0A6 757 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 ANKRD54Q6NXT1 300 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 TMEM107Q6UX40 140 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 SERPINA13PQ6UXR4 307 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 TMIGD1Q6UXZ0 262 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 SLC36A4Q6YBV0 504 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 OTOP2Q7RTS6 562 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 PRICKLE2Q7Z3G6 844 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 BCDIN3DQ7Z5W3 292 aaKnown RBP6.92□□□□□ -1.3
USP48-206ENST00000464577 GLRX5Q86SX6 157 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 FAM20CQ8IXL6 584 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 LRRC56Q8IYG6 542 aaPredicted RBP6.92□□□□□ -1.3
USP48-206ENST00000464577 APCDD1Q8J025 514 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 NATD1Q8N6N6 113 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 OR4M2Q8NGB6 313 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 OR2AP1Q8NGE2 309 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 OR5AK3PQ8NH89 298 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 LRRC20Q8TCA0 184 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 ACOT12Q8WYK0 555 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 UCN3Q969E3 161 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 VOPP1Q96AW1 172 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 NEURL3Q96EH8 262 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 MED8Q96G25 268 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 PPP1R16AQ96I34 528 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 LRR1Q96L50 414 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 ZNF354BQ96LW1 612 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 UBL7Q96S82 380 aaPredicted RBP6.92□□□□□ -1.3
USP48-206ENST00000464577 ARHGAP9Q9BRR9 750 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 NLNQ9BYT8 704 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 NARFLQ9H6Q4 476 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 GALNT9Q9HCQ5 603 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 DMRT3Q9NQL9 472 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 SEMA3GQ9NS98 782 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 TAS2R7Q9NYW3 318 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 POLHQ9Y253 713 aa6.92□□□□□ -1.3
USP48-206ENST00000464577 NUP214P35658 2090 aaPredicted RBP6.91□□□□□ -1.3
USP48-206ENST00000464577 LOC102723532A0A0G2JNH3 316 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 A0A1W2PRQ8 180 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 C7orf66A4D0T2 115 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 SMLR1H3BR10 107 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 CHP2O43745 196 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 SH3BGRLO75368 114 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 NME6O75414 186 aaPredicted RBP6.91□□□□□ -1.3
USP48-206ENST00000464577 KLHL18O94889 574 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 PDGFAP04085 211 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 TPOP07202 933 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 CYBAP13498 195 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 GALP22466 123 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 IMPA1P29218 277 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 SLC6A1P30531 599 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 BDKRB1P46663 353 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 KCNJ5P48544 419 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 SMSP52788 366 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 MC1RQ01726 317 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 TAGLNQ01995 201 aaKnown RBP6.91□□□□□ -1.3
USP48-206ENST00000464577 ACSM1Q08AH1 577 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 GINS1Q14691 196 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 Q6ZNB5 142 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 RFLNAQ6ZTI6 216 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 MRGPREQ86SM8 312 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 IQCF1Q8N6M8 205 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 ARIH2OSQ8N7S6 290 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 C2orf69Q8N8R5 385 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 ZNF485Q8NCK3 441 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 RNFT2Q96EX2 444 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 TMEM19Q96HH6 336 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 NECTIN4Q96NY8 510 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 EFCAB11Q9BUY7 163 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 RANBP3Q9H6Z4 567 aaPredicted RBP6.91□□□□□ -1.3
USP48-206ENST00000464577 SLC28A3Q9HAS3 691 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 TMEM161AQ9NX61 479 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 MAT2BQ9NZL9 334 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 RNF181Q9P0P0 153 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 ING4Q9UNL4 249 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 NCKAP1Q9Y2A7 1128 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 KCNE2Q9Y6J6 123 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 ISM1B1AKI9 464 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 GREM1O60565 184 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 PLOD3O60568 738 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 TBX19O60806 448 aa6.91□□□□□ -1.3
USP48-206ENST00000464577 ADAMTS4O75173 837 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms