RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 AKTIPQ9H8T0 292 aa13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 SLAMF7Q9NQ25 335 aa13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 INTS9Q9NV88 658 aaKnown RBP13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 TAS2R7Q9NYW3 318 aa13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 EXO1Q9UQ84 846 aaKnown RBP13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 ENTPD4Q9Y227 616 aa13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 SPENQ96T58 3664 aaKnown RBP13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 OR5H15A6NDH6 313 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 TMEM200CA6NKL6 621 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 GABRR3A8MPY1 467 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 SLCO1B7G3V0H7 640 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 FCHO1O14526 889 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 CT62P0C5K7 136 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 KITP10721 976 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 MPIP34949 423 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 CD96P40200 585 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 ASMTP46597 345 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 TNFSF10P50591 281 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 EMX2Q04743 252 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 DUSP2Q05923 314 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 FUT7Q11130 342 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 MAP4K2Q12851 820 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 MAD2L1Q13257 205 aaPredicted RBP13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 TUBA3CQ13748 450 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 CEBPEQ15744 281 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 SMU1Q2TAY7 513 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 PRICKLE4Q2TBC4 344 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 IL23RQ5VWK5 629 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 TUBA3EQ6PEY2 450 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 RNF111Q6ZNA4 994 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 PRICKLE2Q7Z3G6 844 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 LIX1Q8N485 282 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 ADCY4Q8NFM4 1077 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 CLHC1Q8NHS4 586 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 GFM2Q969S9 779 aaKnown RBP13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 BBS4Q96RK4 519 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 C1orf50Q9BV19 199 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 BRINP2Q9C0B6 783 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 LIN28AQ9H9Z2 209 aaKnown RBP13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 MEAF6Q9HAF1 191 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 ANKRD10Q9NXR5 420 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 LUZP4Q9P127 313 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 MYOTQ9UBF9 498 aa13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 MARCOQ9UEW3 520 aaPredicted RBP13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 EIF3LQ9Y262 564 aaKnown RBP13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 YARS2Q9Y2Z4 477 aaKnown RBP13.48□□□□□ -0.25
SQSTM1-205ENST00000464493 TRAV17A0A0B4J275 112 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 TRPC5OSA6NMA1 111 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 TTLL8A6PVC2 850 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 HDAC3O15379 428 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 AKAP10O43572 662 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 VPS4BO75351 444 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 ITGA10O75578 1167 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 OR2J2O76002 312 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 SORBS2O94875 1100 aaKnown RBP13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 LRATO95237 230 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 PRPS2P11908 318 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 S1PR1P21453 382 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 SSTR4P31391 388 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 PTGER1P34995 402 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 ST13P50502 369 aaKnown RBP13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 SLC37A1P57057 533 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 OC90Q02509 493 aaPredicted RBP13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 MGAT2Q10469 447 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 ZNF169Q14929 603 aaPredicted RBP13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 PRSS53Q2L4Q9 553 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 FAM111BQ6SJ93 734 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 C16orf47Q6ZP98 133 aaPredicted RBP13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 SLC29A4Q7RTT9 530 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 ZNF605Q86T29 641 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 WDR75Q8IWA0 830 aaKnown RBP13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 C9orf40Q8IXQ3 194 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 VWA5B2Q8N398 1253 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 TMEM156Q8N614 296 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 Q8NA96 180 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 OR7G1Q8NGA0 311 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 SUN3Q8TAQ9 357 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 NUBPLQ8TB37 319 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 PIWIL2Q8TC59 973 aaKnown RBP13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 OR10A5Q9H207 317 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 REEP4Q9H6H4 257 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 MAT2BQ9NZL9 334 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 ZNF462Q96JM2 2506 aa13.47□□□□□ -0.25
SQSTM1-205ENST00000464493 OR6C76A6NM76 312 aa13.46□□□□□ -0.25
SQSTM1-205ENST00000464493 MYO1GB0I1T2 1018 aa13.46□□□□□ -0.25
SQSTM1-205ENST00000464493 WWP2O00308 870 aa13.46□□□□□ -0.25
SQSTM1-205ENST00000464493 ATP8B1O43520 1251 aa13.46□□□□□ -0.25
SQSTM1-205ENST00000464493 SLC28A2O43868 658 aa13.46□□□□□ -0.25
SQSTM1-205ENST00000464493 CLPSP04118 112 aa13.46□□□□□ -0.25
SQSTM1-205ENST00000464493 TRHRP34981 398 aaPredicted RBP13.46□□□□□ -0.25
SQSTM1-205ENST00000464493 CYB561P49447 251 aa13.46□□□□□ -0.25
SQSTM1-205ENST00000464493 HLCSP50747 726 aa13.46□□□□□ -0.25
SQSTM1-205ENST00000464493 PTGR1Q14914 329 aa13.46□□□□□ -0.25
SQSTM1-205ENST00000464493 OR1C1Q15619 314 aa13.46□□□□□ -0.25
SQSTM1-205ENST00000464493 LTB4RQ15722 352 aa13.46□□□□□ -0.25
SQSTM1-205ENST00000464493 HSP90B2PQ58FF3 399 aa13.46□□□□□ -0.25
SQSTM1-205ENST00000464493 ZNF468Q5VIY5 522 aaPredicted RBP13.46□□□□□ -0.25
SQSTM1-205ENST00000464493 SPINK14Q6IE38 97 aa13.46□□□□□ -0.25
SQSTM1-205ENST00000464493 R3HCC1LQ7Z5L2 792 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms