RNA–Protein interactions for RNA: ENST00000462577.5

PDCD4-204, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-204ENST00000462577 GTF3C1Q12789 2109 aa4.85□□□□□ -1.63
PDCD4-204ENST00000462577 BSNQ9UPA5 3926 aa4.85□□□□□ -1.63
PDCD4-204ENST00000462577 BOD1L1Q8NFC6 3051 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 NINQ8N4C6 2090 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 NSG1A0A0A6YYJ2 146 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 A0A0G2JN53 185 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 A0A1W2PR48 441 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 TMEM120BA0PK00 339 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 C1orf226A1L170 272 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 ARGFXA6NJG6 315 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 HMGB1P1B2RPK0 211 aaPredicted RBP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 MKRN2OSH3BPM6 223 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 SLC28A1O00337 649 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 SAP18O00422 153 aaKnown RBP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 RTCAO00442 366 aaKnown RBP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 KLF11O14901 512 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 RGS14O43566 566 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 TMPRSS11DO60235 418 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 GUCY1B2O75343 617 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 EEDO75530 441 aaKnown RBP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 SERPINE1P05121 402 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 CHRNGP07510 517 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 IFI6P09912 130 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 FAM58BPP0C7Q3 252 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 NR2F6P10588 404 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 CPN2P22792 545 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 TLX1P31314 330 aaPredicted RBP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 TIA1P31483 386 aaKnown RBP eCLIP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 ARRB2P32121 409 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 BUD31P41223 144 aaPredicted RBP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 GPR143P51810 404 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 NEK2P51955 445 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 PGDP52209 483 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 HNRNPFP52597 415 aaKnown RBP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 SLC26A5P58743 744 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 MAGOHP61326 146 aaKnown RBP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 RAE1P78406 368 aaKnown RBP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 EEF1A2Q05639 463 aaKnown RBP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 Q0VFX4 171 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 SERTAD2Q14140 314 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 ABRAXAS2Q15018 415 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 KIAA0040Q15053 153 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 ELAVL1Q15717 326 aaKnown RBP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 NSDHLQ15738 373 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 CEBPEQ15744 281 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 SMU1Q2TAY7 513 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 UGT3A2Q3SY77 523 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 MINDY4Q4G0A6 757 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 LACTB2Q53H82 288 aaPredicted RBP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 SOWAHCQ53LP3 525 aaPredicted RBP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 SFT2D3Q587I9 215 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 TTMPQ5BVD1 217 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 XKR7Q5GH72 579 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 ARL13AQ5H913 290 aaPredicted RBP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 CRB2Q5IJ48 1285 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 TCHHL1Q5QJ38 904 aaPredicted RBP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 VWA5B1Q5TIE3 1220 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 CES4AQ5XG92 561 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 FBXW10Q5XX13 1052 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 PAPD4Q6PIY7 484 aaKnown RBP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 ATG14Q6ZNE5 492 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 SHISA6Q6ZSJ9 500 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 LANCL3Q6ZV70 420 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 IKBIPQ70UQ0 350 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 COMMD6Q7Z4G1 85 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 NUDCD3Q8IVD9 361 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 KBTBD2Q8IY47 623 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 CLYBLQ8N0X4 340 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 GALNT16Q8N428 558 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 C1orf52Q8N6N3 182 aaKnown RBP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 TMEM52Q8NDY8 209 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 NFAM1Q8NET5 270 aaPredicted RBP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 FDCSPQ8NFU4 85 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 OR14A16Q8NHC5 309 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 C9orf43Q8TAL5 461 aaPredicted RBP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 DNAJB14Q8TBM8 379 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 ELP5Q8TE02 316 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 ANKRD9Q96BM1 317 aaPredicted RBP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 MTFMTQ96DP5 389 aaKnown RBP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 PTCHD1Q96NR3 888 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 BBC3Q96PG8 261 aaPredicted RBP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 KCNA7Q96RP8 456 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 LMF1Q96S06 567 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 CSF3RQ99062 836 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 SORT1Q99523 831 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 LPAR4Q99677 370 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 MAPKAP1Q9BPZ7 522 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 SLC25A23Q9BV35 468 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 SORBS1Q9BX66 1292 aaKnown RBP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 MRPL1Q9BYD6 325 aaKnown RBP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 ACPTQ9BZG2 426 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 SEMA4CQ9C0C4 833 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 LHPPQ9H008 270 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 RNF32Q9H0A6 362 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 CENPHQ9H3R5 247 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 TUBB1Q9H4B7 451 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 RPF2Q9H7B2 306 aaKnown RBP4.84□□□□□ -1.63
PDCD4-204ENST00000462577 MMP25Q9NPA2 562 aa4.84□□□□□ -1.63
PDCD4-204ENST00000462577 MYNNQ9NPC7 610 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms