RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 CLCN2P51788 898 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 ART1P52961 327 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 ARFIP1P53367 373 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 IGLV3-21P80748 117 aaPredicted RBP7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 TNFRSF17Q02223 184 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 TGM3Q08188 693 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 TBL3Q12788 808 aaKnown RBP7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 CUL3Q13618 768 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 RTL6Q6ICC9 239 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 ARHGAP11AQ6P4F7 1023 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 TREML4Q6UXN2 200 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 CHSY3Q70JA7 882 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 MILR1Q7Z6M3 343 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 CLNKQ7Z7G1 428 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 SLC22A9Q8IVM8 553 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 ZNF595Q8IYB9 648 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 ZCCHC7Q8N3Z6 543 aaKnown RBP7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 BANPQ8N9N5 519 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 PSD4Q8NDX1 1056 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 SRFBP1Q8NEF9 429 aaKnown RBP7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 MYRIPQ8NFW9 859 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 NCLNQ969V3 563 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 RGMAQ96B86 450 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 ANKRD9Q96BM1 317 aaPredicted RBP7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 REPS1Q96D71 796 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 VMP1Q96GC9 406 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 APOPT1Q96IL0 206 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 TMEM109Q9BVC6 243 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 ROGDIQ9GZN7 287 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 CXXC4Q9H2H0 198 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 DDX31Q9H8H2 851 aaKnown RBP7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 TNFRSF12AQ9NP84 129 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 PRTFDC1Q9NRG1 225 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 PNPLA3Q9NST1 481 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 KCNN3Q9UGI6 736 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 DCDC2Q9UHG0 476 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 FBXW2Q9UKT8 454 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 ATG4BQ9Y4P1 393 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 ASB4Q9Y574 426 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 FAM215AQ9Y5M1 114 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 MED12LQ86YW9 2145 aa7.33□□□□□ -1.24
CDC42BPA-210ENST00000462553 MYOCOSA0A1B0GUC4 107 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 TLDC2A0PJX2 215 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 FAM166BA8MTA8 275 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 COPEO14579 308 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 FGF17O60258 216 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 ZNF354AO60765 605 aaPredicted RBP7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 CTNSO60931 367 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 LDB3O75112 727 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 OR2J2O76002 312 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 PDE9AO76083 593 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 SUPT7LO94864 414 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 OR6B1O95007 311 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 IGHG3P01860 377 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 MYL2P10916 166 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 CHN1P15882 459 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 PTX3P26022 381 aaPredicted RBP7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 ARL1P40616 181 aaPredicted RBP7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 SSR4P51571 173 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 RAP1GDS1P52306 607 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 IST1P53990 364 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 FOXA1P55317 472 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 DLX5P56178 289 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 HSD17B7P56937 341 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 DNAJB13P59910 316 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 PHEXP78562 749 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 ID2Q02363 134 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 ZNF844Q08AG5 666 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 GALNT1Q10472 559 aaPredicted RBP7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 PMPCAQ10713 525 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 LCP2Q13094 533 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 IFT88Q13099 833 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 SLAMF1Q13291 335 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 PCLAFQ15004 111 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 AP5B1Q2VPB7 878 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 CCDC153Q494R4 210 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 C10orf62Q5T681 223 aaPredicted RBP7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 C18orf63Q68DL7 685 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 TMEM211Q6ICI0 200 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 FRMD7Q6ZUT3 714 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 GPRIN3Q6ZVF9 776 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 TMEM200AQ86VY9 491 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 METTL4Q8N3J2 472 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 TMEM156Q8N614 296 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 ZNF321PQ8N8H1 164 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 CDYL2Q8N8U2 506 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 OR2M7Q8NG81 312 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 RND1Q92730 232 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 UCN3Q969E3 161 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 ATP6V1E2Q96A05 226 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 KCNA7Q96RP8 456 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 HBEGFQ99075 208 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 SERPINI1Q99574 410 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 ZNF559Q9BR84 538 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 MRPL1Q9BYD6 325 aaKnown RBP7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 TTTY12Q9BZ98 90 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 ROPN1BQ9BZX4 212 aaPredicted RBP7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 DEFB127Q9H1M4 99 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 LIN28AQ9H9Z2 209 aaKnown RBP7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 ROPN1Q9HAT0 212 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms